Salmonella enterica serotype typhi with nonclassical quinolone resistance phenotype

by Accou-Demartin, Marie, Gaborieau, Valérie, Song, Yajun, Roumagnac, Philippe, Marchou, Bruno, Achtman, Mark, Weill, François-Xavier

A multiplex single nucleotide polymorphism typing assay for detecting mutations that result in decreased fluoroquinolone susceptibility in Salmonella enterica serovars Typhi and Pa...

by Song, Yajun, Roumagnac, Philippe, Weill, François-Xavier, Wain, John, Dolecek, Christiane, Mazzoni, Camila J., Holt, Kathryn E., Achtman, Mark

Evolution and population structure of Salmonella enterica serovar Newport

by Sangal, Vartul, Harbottle, Heather, Mazzoni, Camila J., Helmuth, Reiner, Guerra, Beatriz, Didelot, Xavier, Paglietti, Bianca, Rabsch, Wolfgang, Brisse, Sylvain, Weill, François-Xavier, Roumagnac, Philippe, Achtman, Mark

High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi

by Holt, Kathryn E., Parkhill, Julian, Mazzoni, Camila J., Roumagnac, Philippe, Weill, François-Xavier, Goodhead, Ian, Rance, Richard, Baker, Stephen, Maskell, Duncan J., Wain, John, Dolecek, Christiane, Achtman, Mark, Dougan, Gordon

Phylogeography and molecular epidemiology of yersinia pestis in Madagascar

by Vogler, Amy. J., Chan, Fabien, Wagner, David.M., Roumagnac, Philippe, Lee, Judy, Nera, Roxanne, Eppinger, Mark, Ravel, Jacques, Rahalison, Lila, Rasoamanana, Bruno W., Beckstrom-Sternberg, Stephen M., Achtman, Mark, Chanteau, Suzanne, Keim, Paul

Frequent emergence and limited geographic dispersal of methicillin-resistant Staphylococcus aureus

by Nübel, Ulrich, Roumagnac, Philippe, Feldkamp, Mirjam, Song, Jae-Hoon, Ko, kwan soo, Huang, Yhu-Chering, Coombs, Geoffrey, Ip, Margaret, Westh, Henrik, Skov, Robert, Struelens, Marc J., Goering, Richard V., Strommenger, Birgit, Weller, Annette, Witte, Wolfgang, Achtman, Mark

High-Throughput Genotyping of Salmonella enteric Serovar Typhi allowing geographical assignment of Haplotypes and Pathotypes within an urban district of Jakarta, Indonesia

by Baker, Stephen, Holt, Kathryn E., Van de Vosse, Esther, Roumagnac, Philippe, Whitehead, Sally, King, Emma, Ewels, Philip, Keniry, Andrew, Weill, François-Xavier, Lightfoot, Diane, Van Dissel, Jaap T., Sanderson, Kenneth E., Farrar, Jeremy J., Achtman, Mark, Deloukas, Panagiotis, Dougan, Gordon

Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity

by Morelli, Giovanna, Song, Yajun, Mazzoni, Camila J., Eppinger, Mark, Roumagnac, Philippe, Wagner, David.M., Feldkamp, Mirjam, Kusecek, Barica, Vogler, Amy. J., Li, Yanjun, Cui, Yujun, Thomson, Nicholas R, Jombart, Thibaut, Leblois, Raphaël, Lichtner, Peter, Rahalison, Lila, Petersen, Jeannine M, Balloux, François, Keim, Paul, Wirth, Thierry, Ravel, Jacques, Yang, Ruifu, Carniel, Elisabeth, Achtman, Mark