Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis

ABSTRACT: Bovine tuberculosis (bTB) is a zoonosis causing economic losses and public health risks in many countries. The disease diagnosis in live animals is performed by intradermal tuberculin test, which is based on delayed hypersensitivity reactions. As tuberculosis has complex immune response, this test has limitations in sensitivity and specificity. This study sought to test an alternative approach for in vivo diagnosis of bovine tuberculosis, based on real-time polymerase chain reaction (PCR). DNA samples, extracted from nasal swabs of live cows, were used for SYBR® Green real-time PCR, which is able to differentiate between Mycobacterium tuberculosis and Mycobacterium avium complexes. Statistical analysis was performed to compare the results of tuberculin test, the in vivo gold standard bTB diagnosis method, with real-time PCR, thereby determining the specificity and sensitivity of molecular method. Cervical comparative test (CCT) was performed in 238 animals, of which 193 had suitable DNA from nasal swabs for molecular analysis, as indicated by amplification of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, and were included in the study. In total, 25 (10.5%) of the animals were CCT reactive, of which none was positive in the molecular test. Of the 168 CCT negative animals, four were positive for M. tuberculosis complex at real time PCR from nasal swabs. The comparison of these results generated values of sensitivity and specificity of 0% and 97.6%, respectively; moreover, low coefficients of agreement and correlation (-0.029 and -0.049, respectively) between the results obtained with both tests were also observed. This study showed that real-time PCR from nasal swabs is not suitable for in vivo diagnosis of bovine tuberculosis; thus tuberculin skin test is still the best option for this purpose.

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Main Authors: Mayer,Fabiana Q., Reis,Emily M. dos, Bezerra,André Vinícius A., Rodrigues,Rogério O., Michel,Thais, Cerva,Cristine, Bertagnolli,Angélica C.
Format: Digital revista
Language:English
Published: Colégio Brasileiro de Patologia Animal - CBPA 2017
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2017000600549
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spelling oai:scielo:S0100-736X20170006005492017-09-04Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosisMayer,Fabiana Q.Reis,Emily M. dosBezerra,André Vinícius A.Rodrigues,Rogério O.Michel,ThaisCerva,CristineBertagnolli,Angélica C. Nasal swab real-time PCR bovine tuberculosis tuberculin test molecular diagnosis Mycobacterium tuberculosis complex Mycobacterium avium complex Mycobacterium bovis ABSTRACT: Bovine tuberculosis (bTB) is a zoonosis causing economic losses and public health risks in many countries. The disease diagnosis in live animals is performed by intradermal tuberculin test, which is based on delayed hypersensitivity reactions. As tuberculosis has complex immune response, this test has limitations in sensitivity and specificity. This study sought to test an alternative approach for in vivo diagnosis of bovine tuberculosis, based on real-time polymerase chain reaction (PCR). DNA samples, extracted from nasal swabs of live cows, were used for SYBR® Green real-time PCR, which is able to differentiate between Mycobacterium tuberculosis and Mycobacterium avium complexes. Statistical analysis was performed to compare the results of tuberculin test, the in vivo gold standard bTB diagnosis method, with real-time PCR, thereby determining the specificity and sensitivity of molecular method. Cervical comparative test (CCT) was performed in 238 animals, of which 193 had suitable DNA from nasal swabs for molecular analysis, as indicated by amplification of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, and were included in the study. In total, 25 (10.5%) of the animals were CCT reactive, of which none was positive in the molecular test. Of the 168 CCT negative animals, four were positive for M. tuberculosis complex at real time PCR from nasal swabs. The comparison of these results generated values of sensitivity and specificity of 0% and 97.6%, respectively; moreover, low coefficients of agreement and correlation (-0.029 and -0.049, respectively) between the results obtained with both tests were also observed. This study showed that real-time PCR from nasal swabs is not suitable for in vivo diagnosis of bovine tuberculosis; thus tuberculin skin test is still the best option for this purpose.info:eu-repo/semantics/openAccessColégio Brasileiro de Patologia Animal - CBPAPesquisa Veterinária Brasileira v.37 n.6 20172017-06-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2017000600549en10.1590/s0100-736x2017000600003
institution SCIELO
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country Brasil
countrycode BR
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libraryname SciELO
language English
format Digital
author Mayer,Fabiana Q.
Reis,Emily M. dos
Bezerra,André Vinícius A.
Rodrigues,Rogério O.
Michel,Thais
Cerva,Cristine
Bertagnolli,Angélica C.
spellingShingle Mayer,Fabiana Q.
Reis,Emily M. dos
Bezerra,André Vinícius A.
Rodrigues,Rogério O.
Michel,Thais
Cerva,Cristine
Bertagnolli,Angélica C.
Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis
author_facet Mayer,Fabiana Q.
Reis,Emily M. dos
Bezerra,André Vinícius A.
Rodrigues,Rogério O.
Michel,Thais
Cerva,Cristine
Bertagnolli,Angélica C.
author_sort Mayer,Fabiana Q.
title Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis
title_short Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis
title_full Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis
title_fullStr Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis
title_full_unstemmed Nasal swab real-time PCR is not suitable for in vivo diagnosis of bovine tuberculosis
title_sort nasal swab real-time pcr is not suitable for in vivo diagnosis of bovine tuberculosis
description ABSTRACT: Bovine tuberculosis (bTB) is a zoonosis causing economic losses and public health risks in many countries. The disease diagnosis in live animals is performed by intradermal tuberculin test, which is based on delayed hypersensitivity reactions. As tuberculosis has complex immune response, this test has limitations in sensitivity and specificity. This study sought to test an alternative approach for in vivo diagnosis of bovine tuberculosis, based on real-time polymerase chain reaction (PCR). DNA samples, extracted from nasal swabs of live cows, were used for SYBR® Green real-time PCR, which is able to differentiate between Mycobacterium tuberculosis and Mycobacterium avium complexes. Statistical analysis was performed to compare the results of tuberculin test, the in vivo gold standard bTB diagnosis method, with real-time PCR, thereby determining the specificity and sensitivity of molecular method. Cervical comparative test (CCT) was performed in 238 animals, of which 193 had suitable DNA from nasal swabs for molecular analysis, as indicated by amplification of glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene, and were included in the study. In total, 25 (10.5%) of the animals were CCT reactive, of which none was positive in the molecular test. Of the 168 CCT negative animals, four were positive for M. tuberculosis complex at real time PCR from nasal swabs. The comparison of these results generated values of sensitivity and specificity of 0% and 97.6%, respectively; moreover, low coefficients of agreement and correlation (-0.029 and -0.049, respectively) between the results obtained with both tests were also observed. This study showed that real-time PCR from nasal swabs is not suitable for in vivo diagnosis of bovine tuberculosis; thus tuberculin skin test is still the best option for this purpose.
publisher Colégio Brasileiro de Patologia Animal - CBPA
publishDate 2017
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S0100-736X2017000600549
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