Nematode community metabarcoding using full SSU rRNA sequences
Because of their trophic diversity, high abundance, and relatively well-characterized ecologies, nematodes are often used as soil health indicators. However, the scarcity of informative morphological characters hampers the upscaling of this proxy. In the accompanied study, we present a community analysis approach that uses Oxford Nanopore sequencing to generate full-length sequences of small subunit ribosomal DNAs (SSU rDNA) of nematodes.
Saved in:
| Main Authors: | , , , , , , |
|---|---|
| Format: | Dataset biblioteca |
| Published: |
Wageningen University & Research
|
| Subjects: | Oxford Nanopore sequencing, nematodes, |
| Online Access: | https://research.wur.nl/en/datasets/nematode-community-metabarcoding-using-full-ssu-rrna-sequences |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| Summary: | Because of their trophic diversity, high abundance, and relatively well-characterized ecologies, nematodes are often used as soil health indicators. However, the scarcity of informative morphological characters hampers the upscaling of this proxy. In the accompanied study, we present a community analysis approach that uses Oxford Nanopore sequencing to generate full-length sequences of small subunit ribosomal DNAs (SSU rDNA) of nematodes. |
|---|