Formalin-fixed paraffin embedded colorectal cancer and healthy colonic tissue sample collection 1

Formalin-fixed paraffin embedded (FFPE) tissues from colorectal cancer patients (n=14) and healthy controls (n=13) were obtained from pathology archives for 16S rRNA amplicon sequencing. The FFPE tissue collection includes n=14 colorectal cancer (CRC), n=14 normal adjacent (ADJ) and n=13 healthy control tissues. DNA extraction negatives consisted of blank (n=3) and water (n=3) controls that were concurrently processed with the tissues. Additional controls consisted of empty paraffin samples (n=6).

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Bibliographic Details
Main Authors: Lam, Suk Yee, Ioannou, Athanasia, Konstanti, Prokopis, Visseren, Thijmen, Doukas, Michail, Peppelenbosch, Maikel Petrus, Belzer, Clara, Fuhler, Gwenny Manel
Format: Dataset biblioteca
Published: Erasmus University Medical Center
Subjects:Medical, Multispecies, Raw sequence reads,
Online Access:https://research.wur.nl/en/datasets/formalin-fixed-paraffin-embedded-colorectal-cancer-and-healthy-co
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Description
Summary:Formalin-fixed paraffin embedded (FFPE) tissues from colorectal cancer patients (n=14) and healthy controls (n=13) were obtained from pathology archives for 16S rRNA amplicon sequencing. The FFPE tissue collection includes n=14 colorectal cancer (CRC), n=14 normal adjacent (ADJ) and n=13 healthy control tissues. DNA extraction negatives consisted of blank (n=3) and water (n=3) controls that were concurrently processed with the tissues. Additional controls consisted of empty paraffin samples (n=6).