Hierarchical boosting: a machine-learning framework to detect and classify hard selective sweeps in human populations

[Motivation] Detecting positive selection in genomic regions is a recurrent topic in natural population genetic studies. However, there is little consistency among the regions detected in several genome-wide scans using different tests and/or populations. Furthermore, few methods address the challenge of classifying selective events according to specific features such as age, intensity or state (completeness).

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Bibliographic Details
Main Authors: Pybus, Marc, Luisi, Pierre, Dall'Olio, Giovanni Marco, Uzkudun, Manu, Laayouni, Hafid, Bertranpetit, Jaume, Engelken, Johannes
Other Authors: Ministerio de Economía y Competitividad (España)
Format: artículo biblioteca
Language:English
Published: Oxford University Press 2015-12-15
Online Access:http://hdl.handle.net/10261/151773
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/501100002809
http://dx.doi.org/10.13039/501100004587
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Summary:[Motivation] Detecting positive selection in genomic regions is a recurrent topic in natural population genetic studies. However, there is little consistency among the regions detected in several genome-wide scans using different tests and/or populations. Furthermore, few methods address the challenge of classifying selective events according to specific features such as age, intensity or state (completeness).