AgroLD: A knowledge graph database for plant functional genomics

Recent advances in high -throughput technologies have resulted in tremendous increase in the an10Lmt of data in the agronomic domain. There is an urgent need to effectively integrate complementary information to understand the biological system in its entirety. We have developed AgroLD, a knowledge graph that exploits the Semantic Web technology and some of the relevant standard domain ontologies, to integrate information on plant species and in this way facilitating the formulation of new scientific hypotheses. This chapter outlines some integration results of the project, which initially focused on genomics, proteomics and phenomics.

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Bibliographic Details
Main Authors: Larmande, Pierre, Tagny Ngompé, Gildas, Venkatesan, Aravind, Ruiz, Manuel
Format: book_section biblioteca
Language:eng
Published: Springer
Online Access:http://agritrop.cirad.fr/604056/
http://agritrop.cirad.fr/604056/1/ID604056.pdf
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Summary:Recent advances in high -throughput technologies have resulted in tremendous increase in the an10Lmt of data in the agronomic domain. There is an urgent need to effectively integrate complementary information to understand the biological system in its entirety. We have developed AgroLD, a knowledge graph that exploits the Semantic Web technology and some of the relevant standard domain ontologies, to integrate information on plant species and in this way facilitating the formulation of new scientific hypotheses. This chapter outlines some integration results of the project, which initially focused on genomics, proteomics and phenomics.