Using Galaxy to facilitate RNA-Seq analysis.

Using Galaxy to facilitate RNA-Seq analysis.

In this experiment, two RNA-Seq datasets were analyzed in order to evaluate both, the Galaxy platform and the RNA-Seq analysis suite. We were able to observe that such combination of softwares is really effective on allowing two biologists researchers to perform the whole transcriptome analysis through a intuitive web interface.

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Bibliographic Details
Main Authors: NAGAI, L. A. E., SILVA, F. R., CINTRA, L. C., GIACHETTO, P. F., ZERLOTINI NETO, A.
Other Authors: LUÍS AUGUSTO EIJY NAGAI, Estagiário do CNPTIA; FELIPE RODRIGUES DA SILVA, CNPTIA; LEANDRO CARRIJO CINTRA, CNPTIA; POLIANA FERNANDA GIACHETTO, CNPTIA; ADHEMAR ZERLOTINI NETO, CNPTIA.
Format: Anais e Proceedings de eventos biblioteca
Language:English
eng
Published: 2013-01-28
Subjects:Bioinformática, Sequenciamento de RNA, Plataforma Galaxy, Sequence analysis, Bioinformatics, Computer software,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/946554
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Summary:In this experiment, two RNA-Seq datasets were analyzed in order to evaluate both, the Galaxy platform and the RNA-Seq analysis suite. We were able to observe that such combination of softwares is really effective on allowing two biologists researchers to perform the whole transcriptome analysis through a intuitive web interface.

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