GenSAS: A Web-Based Platform for Structural and Functional Annotation and Curation of Genomes
<p>The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and other structural features as well as functional annotation tools. GenSAS integrates with JBrowse and Apollo to provide visualization and editing.</p> <p>GenSAS is completely web-based with no software to install. User accounts ensure data is kept private and progress is saved automatically. Projects can be shared with other GenSAS users for collaborative annotation. Tools settings are customizable and tools can be used with user uploaded evidence files or with provided global library files for repeat, transcript and protein alignments. Results are exported in GFF3 and FASTA file formats. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: GenSAS web site.</p> <p>File Name: Web Page, url: <a href="https://www.gensas.org/">https://www.gensas.org/</a> </p></li></ul><p></p>
| Main Authors: | , , , , , , , , |
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| Format: | Software biblioteca |
| Published: |
2018
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| Subjects: | Genomics and transcriptomics, Sequence analysis, Genetics, Gene expression (incl. microarray and other genome-wide approaches), GenSAS, genome sequence annotation, |
| Online Access: | https://figshare.com/articles/software/GenSAS_A_Web-Based_Platform_for_Structural_and_Functional_Annotation_and_Curation_of_Genomes/24661563 |
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| Summary: | <p>The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and other structural features as well as functional annotation tools. GenSAS integrates with JBrowse and Apollo to provide visualization and editing.</p>
<p>GenSAS is completely web-based with no software to install. User accounts ensure data is kept private and progress is saved automatically. Projects can be shared with other GenSAS users for collaborative annotation. Tools settings are customizable and tools can be used with user uploaded evidence files or with provided global library files for repeat, transcript and protein alignments. Results are exported in GFF3 and FASTA file formats. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: GenSAS web site.</p> <p>File Name: Web Page, url: <a href="https://www.gensas.org/">https://www.gensas.org/</a> </p></li></ul><p></p> |
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