Imputed GbS-derived SNPs for Maize Landrace Accessions Represented in the SeeD-Maize GWAS Panel Recalled Using the B73 v.4 Reference Genome

This study presents the imputed SNP profiles from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel. The positions in the VCF files have been mapped against version 4 of the maize genome. The imputation was performed using the Beagle software.

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Bibliographic Details
Main Authors: Hearne, Sarah, Chen, Charles, Buckler, Ed, Mitchell, Sharon, Valdés, Jose Arcadio
Other Authors: Dreher, Kate
Format: Genotypic data biblioteca
Language:English
Published: CIMMYT Research Data & Software Repository Network 2017
Subjects:Agricultural Sciences, Agricultural research, Maize, Zea mays, Genotypes, Genome-Wide Association Study,
Online Access:https://hdl.handle.net/11529/8702394
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Description
Summary:This study presents the imputed SNP profiles from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel. The positions in the VCF files have been mapped against version 4 of the maize genome. The imputation was performed using the Beagle software.