The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars

Microsatellite variation at the nuclear and chloroplast genomes was evaluated for wild European and wild American hops, in order to assess the genetic diversity and origin of cultivated hops. Seven nuclear loci and 32 chloroplast loci were used in the analysis of 182 hop accessions including wild European (68), wild American (48), and cultivars (66). A total of 116 alleles were identified using 7 nuclear microsatellites showing different averages of polymorphism and distribution in the wild American and European accessions and cultivars. Two main groups were established as revealed by several statistical analyses; one including European wild accessions and cultivars and a second group consisting of American wild accessions. Three polymorphic chloroplast microsatellite loci were detected, six alleles were scored which defined a total of five haplotypes that were exclusive or presented different distribution between American and European wild accessions. A major influence of the wild European haplotypes was detected among hop cultivars. To the best of our knowledge, this is the first work reporting the use of chloroplast microsatellites in hops. © 2009 Springer Science+Business Media B.V.

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Main Authors: Peredo, E. L., Revilla, M. Á, Reed, B. M., Javornik, B., Cires, E., Prieto, J. A. F., Arroyo-García, R.
Format: journal article biblioteca
Language:eng
Published: 2010
Online Access:http://hdl.handle.net/20.500.12792/3382
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spelling dig-inia-es-20.500.12792-33822020-12-15T09:47:58Z The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars Peredo, E. L. Revilla, M. Á, Reed, B. M. Javornik, B. Cires, E. Prieto, J. A. F. Arroyo-García, R. Microsatellite variation at the nuclear and chloroplast genomes was evaluated for wild European and wild American hops, in order to assess the genetic diversity and origin of cultivated hops. Seven nuclear loci and 32 chloroplast loci were used in the analysis of 182 hop accessions including wild European (68), wild American (48), and cultivars (66). A total of 116 alleles were identified using 7 nuclear microsatellites showing different averages of polymorphism and distribution in the wild American and European accessions and cultivars. Two main groups were established as revealed by several statistical analyses; one including European wild accessions and cultivars and a second group consisting of American wild accessions. Three polymorphic chloroplast microsatellite loci were detected, six alleles were scored which defined a total of five haplotypes that were exclusive or presented different distribution between American and European wild accessions. A major influence of the wild European haplotypes was detected among hop cultivars. To the best of our knowledge, this is the first work reporting the use of chloroplast microsatellites in hops. © 2009 Springer Science+Business Media B.V. 2020-10-22T14:34:14Z 2020-10-22T14:34:14Z 2010 journal article http://hdl.handle.net/20.500.12792/3382 10.1007/s10722-009-9495-2 eng Attribution-NonCommercial-ShareAlike 4.0 International http://creativecommons.org/licenses/by-nc-sa/4.0/ open access
institution INIA ES
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country España
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libraryname Biblioteca del INIA España
language eng
description Microsatellite variation at the nuclear and chloroplast genomes was evaluated for wild European and wild American hops, in order to assess the genetic diversity and origin of cultivated hops. Seven nuclear loci and 32 chloroplast loci were used in the analysis of 182 hop accessions including wild European (68), wild American (48), and cultivars (66). A total of 116 alleles were identified using 7 nuclear microsatellites showing different averages of polymorphism and distribution in the wild American and European accessions and cultivars. Two main groups were established as revealed by several statistical analyses; one including European wild accessions and cultivars and a second group consisting of American wild accessions. Three polymorphic chloroplast microsatellite loci were detected, six alleles were scored which defined a total of five haplotypes that were exclusive or presented different distribution between American and European wild accessions. A major influence of the wild European haplotypes was detected among hop cultivars. To the best of our knowledge, this is the first work reporting the use of chloroplast microsatellites in hops. © 2009 Springer Science+Business Media B.V.
format journal article
author Peredo, E. L.
Revilla, M. Á, Reed, B. M.
Javornik, B.
Cires, E.
Prieto, J. A. F.
Arroyo-García, R.
spellingShingle Peredo, E. L.
Revilla, M. Á, Reed, B. M.
Javornik, B.
Cires, E.
Prieto, J. A. F.
Arroyo-García, R.
The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars
author_facet Peredo, E. L.
Revilla, M. Á, Reed, B. M.
Javornik, B.
Cires, E.
Prieto, J. A. F.
Arroyo-García, R.
author_sort Peredo, E. L.
title The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars
title_short The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars
title_full The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars
title_fullStr The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars
title_full_unstemmed The influence of European and American wild germplasm in hop (Humulus lupulus L.) cultivars
title_sort influence of european and american wild germplasm in hop (humulus lupulus l.) cultivars
publishDate 2010
url http://hdl.handle.net/20.500.12792/3382
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