Genetic affinities of an eradicated european plasmodium falciparum strain

Malaria was present in most of Europe until the second half of the 20th century, when it was eradicated through a combination of increased surveillance and mosquito control strategies, together with cross-border and political collaboration. Despite the severe burden of malaria on human populations, it remains contentious how the disease arrived and spread in Europe. Here, we report a partial Plasmodium falciparum nuclear genome derived from a set of antique medical slides stained with the blood of malaria-infected patients from Spain’s Ebro Delta, dating to the 1940s. Our analyses of the genome of this now eradicated European P. falciparum strain confirms stronger phylogeographical affinity to present-day strains in circulation in central south Asia, rather than to those in Africa. This points to a longitudinal, rather than a latitudinal, spread of malaria into Europe. In addition, this genome displays two derived alleles in the pfmrp1 gene that have been associated with drug resistance. Whilst this could represent standing variation in the ancestral P. falciparum population, these mutations may also have arisen due to the selective pressure of quinine treatment, which was an anti-malarial drug already in use by the time the sample we sequenced was mounted on a slide.

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Main Authors: De-Dios, Toni, van Dorp, Lucy, Gelabert, Pere, Carøe, Christian, Sandoval-Velasco, Marcela, Fregel, Rosa, Escosa, Raül, Aranda, Carles, Huijben, Silvia, Balloux, François, Gilbert, M. Thomas P., Lalueza-Fox, Carles
Other Authors: Generalitat de Catalunya
Format: artículo biblioteca
Published: Microbiology Society 2019-09-01
Subjects:Malaria, Plasmodium falciparum, Ancient genomics, drug resistance,
Online Access:http://hdl.handle.net/10261/206758
http://dx.doi.org/10.13039/501100002809
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100003329
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spelling dig-ibe-es-10261-2067582021-12-27T16:06:35Z Genetic affinities of an eradicated european plasmodium falciparum strain De-Dios, Toni van Dorp, Lucy Gelabert, Pere Carøe, Christian Sandoval-Velasco, Marcela Fregel, Rosa Escosa, Raül Aranda, Carles Huijben, Silvia Balloux, François Gilbert, M. Thomas P. Lalueza-Fox, Carles Generalitat de Catalunya Ministerio de Economía y Competitividad (España) European Commission Newton Fund Malaria Plasmodium falciparum Ancient genomics drug resistance Malaria was present in most of Europe until the second half of the 20th century, when it was eradicated through a combination of increased surveillance and mosquito control strategies, together with cross-border and political collaboration. Despite the severe burden of malaria on human populations, it remains contentious how the disease arrived and spread in Europe. Here, we report a partial Plasmodium falciparum nuclear genome derived from a set of antique medical slides stained with the blood of malaria-infected patients from Spain’s Ebro Delta, dating to the 1940s. Our analyses of the genome of this now eradicated European P. falciparum strain confirms stronger phylogeographical affinity to present-day strains in circulation in central south Asia, rather than to those in Africa. This points to a longitudinal, rather than a latitudinal, spread of malaria into Europe. In addition, this genome displays two derived alleles in the pfmrp1 gene that have been associated with drug resistance. Whilst this could represent standing variation in the ancestral P. falciparum population, these mutations may also have arisen due to the selective pressure of quinine treatment, which was an anti-malarial drug already in use by the time the sample we sequenced was mounted on a slide. C. L. -F. is supported by Obra Social ‘La Caixa’, Secretaria d’Universitats i Recerca Programme del Departament d’Economia i Coneixement de la Generalitat de Catalunya (GRC 2017 SGR 880) and by FEDER-MINECO (PGC2018-095931-B-100). L. v. D. and F. B. acknowledge financial support from the MRC Newton Fund UK–China NSFC initiative (grants MR/P007597/1 and 81661138006). 2020-04-07T07:33:37Z 2020-04-07T07:33:37Z 2019-09-01 2020-04-07T07:33:37Z artículo http://purl.org/coar/resource_type/c_6501 doi: 10.1099/mgen.0.000289 e-issn: 2057-5858 Microbial Genomics 5(9): (2019) http://hdl.handle.net/10261/206758 10.1099/mgen.0.000289 http://dx.doi.org/10.13039/501100002809 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/501100003329 31454309 Publisher's version http://doi.org/10.1099/mgen.0.000289 Sí open Microbiology Society
institution IBE ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-ibe-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IBE España
topic Malaria
Plasmodium falciparum
Ancient genomics
drug resistance
Malaria
Plasmodium falciparum
Ancient genomics
drug resistance
spellingShingle Malaria
Plasmodium falciparum
Ancient genomics
drug resistance
Malaria
Plasmodium falciparum
Ancient genomics
drug resistance
De-Dios, Toni
van Dorp, Lucy
Gelabert, Pere
Carøe, Christian
Sandoval-Velasco, Marcela
Fregel, Rosa
Escosa, Raül
Aranda, Carles
Huijben, Silvia
Balloux, François
Gilbert, M. Thomas P.
Lalueza-Fox, Carles
Genetic affinities of an eradicated european plasmodium falciparum strain
description Malaria was present in most of Europe until the second half of the 20th century, when it was eradicated through a combination of increased surveillance and mosquito control strategies, together with cross-border and political collaboration. Despite the severe burden of malaria on human populations, it remains contentious how the disease arrived and spread in Europe. Here, we report a partial Plasmodium falciparum nuclear genome derived from a set of antique medical slides stained with the blood of malaria-infected patients from Spain’s Ebro Delta, dating to the 1940s. Our analyses of the genome of this now eradicated European P. falciparum strain confirms stronger phylogeographical affinity to present-day strains in circulation in central south Asia, rather than to those in Africa. This points to a longitudinal, rather than a latitudinal, spread of malaria into Europe. In addition, this genome displays two derived alleles in the pfmrp1 gene that have been associated with drug resistance. Whilst this could represent standing variation in the ancestral P. falciparum population, these mutations may also have arisen due to the selective pressure of quinine treatment, which was an anti-malarial drug already in use by the time the sample we sequenced was mounted on a slide.
author2 Generalitat de Catalunya
author_facet Generalitat de Catalunya
De-Dios, Toni
van Dorp, Lucy
Gelabert, Pere
Carøe, Christian
Sandoval-Velasco, Marcela
Fregel, Rosa
Escosa, Raül
Aranda, Carles
Huijben, Silvia
Balloux, François
Gilbert, M. Thomas P.
Lalueza-Fox, Carles
format artículo
topic_facet Malaria
Plasmodium falciparum
Ancient genomics
drug resistance
author De-Dios, Toni
van Dorp, Lucy
Gelabert, Pere
Carøe, Christian
Sandoval-Velasco, Marcela
Fregel, Rosa
Escosa, Raül
Aranda, Carles
Huijben, Silvia
Balloux, François
Gilbert, M. Thomas P.
Lalueza-Fox, Carles
author_sort De-Dios, Toni
title Genetic affinities of an eradicated european plasmodium falciparum strain
title_short Genetic affinities of an eradicated european plasmodium falciparum strain
title_full Genetic affinities of an eradicated european plasmodium falciparum strain
title_fullStr Genetic affinities of an eradicated european plasmodium falciparum strain
title_full_unstemmed Genetic affinities of an eradicated european plasmodium falciparum strain
title_sort genetic affinities of an eradicated european plasmodium falciparum strain
publisher Microbiology Society
publishDate 2019-09-01
url http://hdl.handle.net/10261/206758
http://dx.doi.org/10.13039/501100002809
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100003329
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