Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening

An understanding of biological mechanisms that could be involved in the stress response of animal cattle prior to slaughter is critical to create effective strategies aiming at the production of high-quality meat. The sarcoplasmic proteome of directly extracted samples from normal and high ultimate pH (pHu) meat groups was studied through a straightforward gel-free strategy supported by liquid chromatography hybrid quadrupole-Orbitrap high-resolution mass spectrometry (LC-HRMS) analysis. A stepped proteomic pipeline combining rapid biomarker hunting supported by qualitative protein Mascot scores followed by targeted label-free peptide quantification revealed 26 descriptors that characterized meat groups assayed. The functional study of the proposed biomarkers suggested their relevant role in metabolic, chaperone/stress-related, muscle contractility/fiber organization, and transport activities. The efficiency, flexibility, rapidity, and easiness of the methodology proposed can positively contribute to the creation of innovative proteomic alternatives addressing meat quality assessment.

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Bibliographic Details
Main Authors: Sentandreu, Enrique, Fuente-García, Claudia, Pardo, Olga, Oliván, Mamen, León, Núria, Aldai, Noelia, Yusà, Vicent, Sentandreu, Miguel Ángel
Other Authors: Eusko Jaurlaritza
Format: artículo biblioteca
Language:English
Published: American Chemical Society 2021-06-25
Subjects:High-resolution proteomics, Meat biomarkers, Meat quality assessment, Rapid proteomic screening, Pre-slaughter stress,
Online Access:http://hdl.handle.net/10261/246695
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100003086
http://dx.doi.org/10.13039/100007652
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spelling dig-iata-es-10261-2466952022-12-21T13:44:03Z Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening Sentandreu, Enrique Fuente-García, Claudia Pardo, Olga Oliván, Mamen León, Núria Aldai, Noelia Yusà, Vicent Sentandreu, Miguel Ángel Eusko Jaurlaritza Ministerio de Ciencia, Innovación y Universidades (España) CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA) European Commission High-resolution proteomics Meat biomarkers Meat quality assessment Rapid proteomic screening Pre-slaughter stress An understanding of biological mechanisms that could be involved in the stress response of animal cattle prior to slaughter is critical to create effective strategies aiming at the production of high-quality meat. The sarcoplasmic proteome of directly extracted samples from normal and high ultimate pH (pHu) meat groups was studied through a straightforward gel-free strategy supported by liquid chromatography hybrid quadrupole-Orbitrap high-resolution mass spectrometry (LC-HRMS) analysis. A stepped proteomic pipeline combining rapid biomarker hunting supported by qualitative protein Mascot scores followed by targeted label-free peptide quantification revealed 26 descriptors that characterized meat groups assayed. The functional study of the proposed biomarkers suggested their relevant role in metabolic, chaperone/stress-related, muscle contractility/fiber organization, and transport activities. The efficiency, flexibility, rapidity, and easiness of the methodology proposed can positively contribute to the creation of innovative proteomic alternatives addressing meat quality assessment. Department of Economic Development and Infrastructures of the Basque Government is acknowledged for the doctoral fellowship of C.F.G. Funding from Project RTA2014-00034-C04 (Spanish Instituto Nacional de Investigación y Tecnología Agraria, INIA), funding and contract of E. Sentandreu from Project RTI2018-096162-R-C22 (Spanish Agencia Estatal de Investigación), and FEDER funds are also fully acknowledged. Peer reviewed 2021-07-28T06:02:29Z 2021-07-28T06:02:29Z 2021-06-25 artículo http://purl.org/coar/resource_type/c_6501 Journal of Agricultural and Food Chemistry 69 (26): 7478-7487 (2021) 0021-8561 http://hdl.handle.net/10261/246695 10.1021/acs.jafc.1c02016 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/501100003086 http://dx.doi.org/10.13039/100007652 34171191 en #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/RTA2014-00034-C04 info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/RTI2018-096162-R-C22 Publisher's version https://doi.org/10.1021/acs.jafc.1c02016 Sí open American Chemical Society
institution IATA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-iata-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IATA España
language English
topic High-resolution proteomics
Meat biomarkers
Meat quality assessment
Rapid proteomic screening
Pre-slaughter stress
High-resolution proteomics
Meat biomarkers
Meat quality assessment
Rapid proteomic screening
Pre-slaughter stress
spellingShingle High-resolution proteomics
Meat biomarkers
Meat quality assessment
Rapid proteomic screening
Pre-slaughter stress
High-resolution proteomics
Meat biomarkers
Meat quality assessment
Rapid proteomic screening
Pre-slaughter stress
Sentandreu, Enrique
Fuente-García, Claudia
Pardo, Olga
Oliván, Mamen
León, Núria
Aldai, Noelia
Yusà, Vicent
Sentandreu, Miguel Ángel
Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening
description An understanding of biological mechanisms that could be involved in the stress response of animal cattle prior to slaughter is critical to create effective strategies aiming at the production of high-quality meat. The sarcoplasmic proteome of directly extracted samples from normal and high ultimate pH (pHu) meat groups was studied through a straightforward gel-free strategy supported by liquid chromatography hybrid quadrupole-Orbitrap high-resolution mass spectrometry (LC-HRMS) analysis. A stepped proteomic pipeline combining rapid biomarker hunting supported by qualitative protein Mascot scores followed by targeted label-free peptide quantification revealed 26 descriptors that characterized meat groups assayed. The functional study of the proposed biomarkers suggested their relevant role in metabolic, chaperone/stress-related, muscle contractility/fiber organization, and transport activities. The efficiency, flexibility, rapidity, and easiness of the methodology proposed can positively contribute to the creation of innovative proteomic alternatives addressing meat quality assessment.
author2 Eusko Jaurlaritza
author_facet Eusko Jaurlaritza
Sentandreu, Enrique
Fuente-García, Claudia
Pardo, Olga
Oliván, Mamen
León, Núria
Aldai, Noelia
Yusà, Vicent
Sentandreu, Miguel Ángel
format artículo
topic_facet High-resolution proteomics
Meat biomarkers
Meat quality assessment
Rapid proteomic screening
Pre-slaughter stress
author Sentandreu, Enrique
Fuente-García, Claudia
Pardo, Olga
Oliván, Mamen
León, Núria
Aldai, Noelia
Yusà, Vicent
Sentandreu, Miguel Ángel
author_sort Sentandreu, Enrique
title Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening
title_short Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening
title_full Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening
title_fullStr Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening
title_full_unstemmed Protein Biomarkers of Bovine Defective Meats at a Glance: Gel-Free Hybrid Quadrupole-Orbitrap Analysis for Rapid Screening
title_sort protein biomarkers of bovine defective meats at a glance: gel-free hybrid quadrupole-orbitrap analysis for rapid screening
publisher American Chemical Society
publishDate 2021-06-25
url http://hdl.handle.net/10261/246695
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100003086
http://dx.doi.org/10.13039/100007652
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