CottonGen JBrowse

<p>CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the <a href="https://www.cottongen.org/tools/jbrowse">JBrowse link in the Tools menu</a>.</p> <p>Whole Genomes</p> <ul> <li>2019-03: Gossypium barbadense AD2 Hai-7124 genome ZJU v1.1_a1</li> <li>2018-12: Gossypium barbadense AD2 3-79 genome HAU v2_a1</li> <li>2015-12: Gossypium barbadense AD2 3-79 genome HAU v1_a1</li> <li>2019-03: Gossypium hirsutum AD1 genome ZJU-Improved v2.1_a1</li> <li>2018-12: Gossypium hirsutum AD1 genome HAU v1_a1</li> <li>2017-09: Gossypium hirsutum AD1 genome TX-JGI v1.1_a1</li> <li>2015-04: Gossypium hirsutum AD1 genome NAU-NBI v1.1_a1.1</li> <li>2015-04: Gossypium hirsutum AD1 genome CGP-BGI v1_a1</li> <li>2018-05: Gossypium arboreum A2 genome CRI-Updated v1_a1</li> <li>2014-05: Gossypium arboreum A2 genome CGP-BGI v2_a1</li> <li>2012-12: Gossypium raimondii D5 genome JGI v2_a2.1</li> <li>2012-08: Gossypium raimondii D5 genome CGP-BGI v1_a1</li> </ul> <p>Chloroplast Genomes</p> <ul> <li>Gossypium arboreum chloroplast</li> <li>Gossypium barbadense chloroplast</li> <li>Gossypium hirsutum chloroplast</li> <li>Gossypium raimondii chloroplast</li> </ul> <p>Please watch the JBrowse tutorial for more details about how to navigate and use JBrowse.</p> <div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: CottonGen JBrowse and User Manual.</p> <p>File Name: Web Page, url: <a href="https://www.cottongen.org/node/8287911" target="_blank">https://www.cottongen.org/node/8287911</a> </p><p>CottonGen has an instance of the JBrowse genome browser for viewing genome data. A list of the genomes available in CottonGen can be accessed by clicking the <a href="https://www.cottongen.org/tools/jbrowse" target="_blank">JBrowse link in the Tools menu</a>. Whole Genomes * 2019-03: Gossypium barbadense AD2 Hai-7124 genome ZJU v1.1_a1 * 2018-12: Gossypium barbadense AD2 3-79 genome HAU v2_a1 * 2015-12: Gossypium barbadense AD2 3-79 genome HAU v1_a1 * 2019-03: Gossypium hirsutum AD1 genome ZJU-Improved v2.1_a1 * 2018-12: Gossypium hirsutum AD1 genome HAU v1_a1 * 2017-09: Gossypium hirsutum AD1 genome TX-JGI v1.1_a1 * 2015-04: Gossypium hirsutum AD1 genome NAU-NBI v1.1_a1.1 * 2015-04: Gossypium hirsutum AD1 genome CGP-BGI v1_a1 * 2018-05: Gossypium arboreum A2 genome CRI-Updated v1_a1 * 2014-05: Gossypium arboreum A2 genome CGP-BGI v2_a1 * 2012-12: Gossypium raimondii D5 genome JGI v2_a2.1 * 2012-08: Gossypium raimondii D5 genome CGP-BGI v1_a1 Chloroplast Genomes * Gossypium arboreum chloroplast * Gossypium barbadense chloroplast * Gossypium hirsutum chloroplast * Gossypium raimondii chloroplast Please watch the JBrowse tutorial for more details about how to navigate and use JBrowse.</p></li></ul>

Bibliographic Details

Main Authors:	Taein Lee (17478699), Sook Jung (4674), Ksenija Gasic (17481210), Todd Campbell (17481213), Jing Yu (81085), Jodi Humann (17481216), Heidi Hough (8224842), Dorrie Main (17481207)
Format:	Dataset biblioteca
Published:	2019
Subjects:	Crop and pasture production, Genetics, Plant biology not elsewhere classified, CottonGen, NP301, cotton, genomics, chloroplast, Online database, data.gov, ARS,
Online Access:	https://figshare.com/articles/dataset/CottonGen_JBrowse/24853263
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