CottonGen BLAST

<p>CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from <em>Gossypium</em> species. This can be done using nucleotide sequences or peptide sequences. BLAST functionality is similar to that on NCBI.</p> <p>BLAST Programs:</p> <ul> <li>blastn: Search a nucleotide database using a nucleotide query.</li> <li>blastx: Search protein database using a translated nucleotide query.</li> <li>tblastn: Search translated nucleotide database using a protein query.</li> <li> <p>blastp: Search protein database using a protein query.</p> <div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Website Pointer for CottonGen BLAST Search.</p> <p>File Name: Web Page, url: <a href="https://www.cottongen.org/blast" target="_blank">https://www.cottongen.org/blast</a> </p><p>CottonGen offers BLAST with genome, transcriptome, peptide and marker sequence databases from *Gossypium* species. This can be done using nucleotide sequences or peptide sequences. BLAST functionality is similar to that on NCBI. Enter or upload FASTA sequence(s) to query and select BLAST database. </p></li> </ul> <p>BLAST Programs:</p> <ul> <li>blastn: Search a nucleotide database using a nucleotide query.</li> <li>blastx: Search protein database using a translated nucleotide query.</li> <li>tblastn: Search translated nucleotide database using a protein query.</li> <li>blastp: Search protein database using a protein query.</li></ul><p></p></li> </ul>

Bibliographic Details

Main Authors:	Taein Lee (17478699), Sook Jung (4674), Ksenija Gasic (17481210), Todd Campbell (17481213), Jing Yu (81085), Jodi Humann (17481216), Heidi Hough (8224842), Dorrie Main (17481207)
Format:	Dataset biblioteca
Published:	2019
Subjects:	Crop and pasture production, Genetics, Plant biology not elsewhere classified, CottonGen, NCBI BLAST, NP301, Online database, data.gov, ARS,
Online Access:	https://figshare.com/articles/dataset/CottonGen_BLAST/24853260
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