Frankliniella occidentalis genome assembly v1.0
<p>The Baylor College of Medicine has sequenced and annotated the <i>Frankliniella occidentalis</i> genome as part of the i5k pilot project. This dataset presents the <i>Frankliniella occidentalis</i> genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the <a href="https://www.ncbi.nlm.nih.gov/assembly/GCA_000697945.1">National Center for Biotechnology Information's GenBank resource</a>. If you wish to use this dataset, please follow the <a href="https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use">Baylor College of Medicine's conditions for data use</a>. </p><div><br>Resources in this dataset:</div><br><ul><li><p>Resource Title: Frankliniella occidentalis genome assembly v1.0 fasta and agp files for contigs and scaffolds .</p> <p>File Name: fraocc_BCM_assembly_v1-0.tar.gz</p><p>Resource Description: </p><p>The attached tar.gz archive (FOCC_BCM_assembly_v1-0.tgz ) contains the following files:</p><p></p> <p>Focc.contigs.80.fa. This file contains the sequence information of the contigs of the <em>Frankliniella occidentalis</em> 1.0 assembly.</p> <p>Focc.scaffolds.50.fa. This file contains the sequence information of the scaffolds of the <em>Frankliniella occidentalis</em> 1.0 assembly.</p> <p>Focc.agp.V2. This file contains information linking the contigs and scaffolds for this assembly. A description of the agp format is available here: http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml</p><p></p></li></ul>
| Main Authors: | , , , , , , , , , , , , , |
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| Format: | Dataset biblioteca |
| Published: |
2019
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| Subjects: | Genomics and transcriptomics, Genetics, Organism project, i5k, arthropods, Frankliniella occidentalis, |
| Online Access: | https://figshare.com/articles/dataset/Frankliniella_occidentalis_genome_assembly_v1_0/24852690 |
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