Impact of the chemical modification of tRNAs anticodon loop on the variability and evolution of codon usage in proteobacteria

The data presented here corresponds to the supplementary data of the article entitled "Impact of the chemical modification of tRNAs anticodon loop on the variability and evolution of codon usage in proteobacteria" by Delgado et al. It contains supplementary figures, supplemntary tables and scripts including: - Relations between codon usage and GC% in proteobacteria - Phylogenetic trees coupled to bar graphs showing codon usage in proteobacteria - Relations between codon usage and the number of genes coding for tRNAs in proteobacteria - Relations between the presence of genes coding for tRNA modification enzymes and codon usage or GC% - Scripts required to perform the analyzes presented in the article and this supplementary data

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Bibliographic Details
Main Authors: Sebastian Delgado, Álvaro Armijo, Verónica Bravo, Omar Orellana, Juan Carlos Salazar, Assaf Katz
Other Authors: Katz, Assaf
Published: Repositorio de datos de investigación de la Universidad de Chile 2024
Subjects:Medicine, Health and Life Sciences, Codon usage, Proteobacteria, tRNA, tRNA modifiaction enzyme, N6-threonylcarbamoyladenosine, glutamyl-queuosine, 2-lysidine, 2-thiouridine, Genome evolution,
Online Access:https://doi.org/10.34691/UCHILE/AYDRZL
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