RFPlasmid: predicting plasmid sequences from short-read assembly data using machine learning

by van der Graaf-Van Bloois, Linda, Wagenaar, Jaap A., Zomer, Aldert L.

Development of Kaptive databases for Vibrio parahaemolyticus O-and K-antigen genotyping

by van der Graaf-Van Bloois, Linda, Chen, Hongyou, Wagenaar, Jaap A., Zomer, Aldert L.

Campylobacter fetus subspecies specific PCR assays inferred from comparative genomic analysis for accurate subspecies identification

by van der Graaf - van Bloois, Linda, Zomer, Aldert L., Duim, Birgitta, Wagenaar, Jaap A.

Homologous recombination between genetically divergent campylobacter fetus lineages supports host-associated speciation

by Gilbert, Maarten J., Duim, Birgitta, van der Graaf-van Bloois, Linda, Wagenaar, Jaap A., Zomer, Aldert L.

Antimicrobial resistance in Campylobacter fetus : Emergence and genomic evolution

by van der Graaf-van Bloois, Linda, Duim, Birgitta, Looft, Torey, Veldman, Kees T., Zomer, Aldert L., Wagenaar, Jaap A.

Whole genome sequence analysis indicates recent diversification of mammal-associated Campylobacter fetus and implicates a genetic factor associated with H2S production

by van der Graaf-van Bloois, Linda, Duim, Birgitta, Miller, William G., Forbes, Ken J., Wagenaar, Jaap A., Zomer, Aldert

Campylobacter fetus subspecies contain conserved type IV secretion systems on multiple genomic islands and plasmids

by Van Der Graaf-Van Bloois, Linda, Miller, William G., Yee, Emma, Wagenaar, Jaap A., Gorkiewisz, G., Forbes, Ken J., Zomer, Aldert, Duim, Birgitta

Complete genome sequence of a clinical campylobacter isolate identical to a novel campylobacter species

by Duim, Birgitta, van der Graaf-Van Bloois, Linda, Timmerman, Arjen, Wagenaar, Jaap A., Flipse, Jacky, Wallinga, Janny, Bloembergen, Peter, Miller, William G., Zomer, Aldert L.

Within-Household Transmission and Bacterial Diversity of Staphylococcus pseudintermedius

by Wegener, Alice, Duim, Birgitta, van der Graaf-van Bloois, Linda, Zomer, Aldert L., Visser, Caroline E., Spaninks, Mirlin, Timmerman, Arjen J., Wagenaar, Jaap A., Broens, Els M.

Comparative Genomics of Campylobacter fetus from Reptilesand Mammals Reveals Divergent Evolution in Host-Associated Lineages

by Gilbert, Maarten J., Miller, William G., Yee, Emma, Zomer, Aldert, Van Der Graaf-Van Bloois, Linda, Fitzgerald, C., Forbes, Ken J., Méric, Guillaume, Sheppard, S., Wagenaar, J.A., Duim, Birgitta

A case of persistent diarrhea in a man with the molecular detection of various campylobacter species and the first isolation of candidatus campylobacter infans

by Flipse, Jacky, Duim, Birgitta, Wallinga, Janny A., de Wijkerslooth, Laetitia R.H., van der Graaf-Van Bloois, Linda, Timmerman, Arjen J., Zomer, Aldert L., Veldman, Kees T., Wagenaar, Jaap A., Bloembergen, Peter

Genomic characterization of extended-spectrum cephalosporin-resistant Salmonella enterica in the Colombian poultry chain

by Castellanos, Luis Ricardo, van der Graaf-van Bloois, Linda, Donado-Godoy, Pilar, León, Maribel, Clavijo, Viviana, Arévalo, Alejandra, Bernal, Johan F., Mevius, Dik J., Wagenaar, Jaap A., Zomer, Aldert, Hordijk, Joost

Antimicrobial Resistance in Salmonella enterica Serovar Paratyphi B Variant Java in Poultry from Europe and Latin America

by Castellanos, L.R., Van Der Graaf-Van Bloois, Linda, Donado-Godoy, Pilar, Veldman, K.T., Duarte, Francisco, Acuña, María T., Jarquín, Claudia, Weill, Francois Xavier, Mevius, D.J., Wagenaar, J.A., Hordijk, Joost, Zomer, Aldert L.

Harbor Porpoise Deaths Associated with Erysipelothrix rhusiopathiae, the Netherlands, 2021

by IJsseldijk, Lonneke, Begeman, Lineke, Duim, Birgitta, Gröne, Andrea, Kik, Marja J.L., Klijnstra, Mirjam D., Lakemeyer, Jan, Leopold, Mardik F., Oude Munnink, Bas B., ten Doeschate, Mariel, van Schalkwijk, Linde, Zomer, Aldert, van der Graaf-Van Bloois, Linda, Broens, Els M.

Absence of host-specific genes in canine and human staphylococcus pseudintermedius as inferred from comparative genomics

by Wegener, Alice, Broens, Els M., van der Graaf-Van Bloois, Linda, Zomer, Aldert L., Visser, Caroline E., van Zeijl, Jan, van der Meer, Coby, Kusters, Johannes G., Friedrich, Alex W., Kampinga, Greetje A., Sips, Gregorius J., Smeets, Leonard, van Kerckhoven, Manfred E.J., Timmerman, Arjen J., Wagenaar, Jaap A., Duim, Birgitta

Sources and transmission routes of campylobacteriosis : A combined analysis of genome and exposure data

by Mughini-Gras, Lapo, Pijnacker, Roan, Coipan, Claudia, Mulder, Annemieke C., Fernandes Veludo, Adriana, de Rijk, Sharona, van Hoek, Angela H.A.M., Buij, Ralph, Muskens, Gerard, Koene, Miriam, Veldman, Kees, Duim, Birgitta, van der Graaf-van Bloois, Linda, van der Weijden, Coen, Kuiling, Sjoerd, Verbruggen, Anjo, van der Giessen, Joke, Opsteegh, Marieke, van der Voort, Menno, Castelijn, Greetje A.A., Schets, Franciska M., Blaak, Hetty, Wagenaar, Jaap A., Zomer, Aldert L., Franz, Eelco