Information resources for cassava research and breeding

by Ayling, S., Ferguson, M., Rounsley, S., Kulakow, Peter A.
Published 2016-10-27T08:30:50Z

Mapping of QTL associated with resistance to Cassava Brown Streak and Mosaic Diseases in outcrossing cassava cultivars locally cultivated in Tanzania

by Masumba, E., Merwe, A. van der, Myburg, Z., Kapinga, F., Kasele, S., Kulembeka, H.P., Mkamilo, G.S., Rounsley, S., Prochnik, S.E., Kanju, E., Ferguson, M.
Published 2017-02-02T09:06:17Z

The cassava genome: current progress, future directions

by Prochnik, S.E., Marri, P.R., Desany, B, Rabinowitch, P.D., Kodira, C, Fauquet, Claude M., Tohme, Joseph M., Rodríguez, F., Mohiuddin, M, Harkins, T, Rokhsar, DS, Rounsley, S.
Published 2014-10-02T08:33:20Z

Candidate genes for field resistance to cassava brown streak disease revealed through the analysis of multiple data sources

by Ferguson, M., Eyles, R.P., Garcia-Oliveira, A.L., Kapinga, F., Masumba, E.A., Amuge, T., Bredeson, J.V., Rokhsar, D.S., Lyons, J.B., Shah, T., Rounsley, S., Mkamilo, G.
Published 2023-11-09T14:23:32Z

QTL mapping for pest and disease resistance in cassava and coincidence with some introgression regions derived from M. glaziovii

by Nzuki, I., Katari, M.S., Bredeson, J.V., Masumba, E., Kapinga, F., Salum, K., Mkamilo, G.S., Shah, Tushaar, Lyons, J.B., Rokhsar, D.S., Rounsley, S., Myburg, A.A., Ferguson, Morag E.
Published 2017-07-21

Coffea canephora genome sequencing, a tool for comparative genomics and efficient crop improvement (W511)

by De Kochko, Alexandre, Albert, Victor A., Andrade, Alan Carvalho, Argout, Xavier, Bertrand, Benoît, Giuliano, Giovanni, Graziosi, Giorgio, Henry, Robert, Jayarama, Jayarama, Lashermes, Philippe, Ming, Ray, Nagai, Chifumi, Rounsley, Steve, Sankoff, David, Wincker, Patrick

Sequencing the coffee genome (W152)

by Wincker, Patrick, Albert, Victor A., Andrade, Alan A., Argout, Xavier, Bertrand, Benoît, De Kochko, Alexandre, Giuliano, Giovanni, Graziosi, Giorgio, Henry, Robert, Jayarama, Jayarama, Lashermes, Philippe, Ming, Ray, Nagai, Chifumi, Rounsley, Steve, Sankoff, David

QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert

by Masumba, E.A., Kapinga, F., Mkamilo, G.S., Salum, K., Kulembeka, H.P., Rounsley, S., Bredeson, J.V., Lyons, J.B., Rokhsar, D.S., Kanju, E., Katari, M.S., Myburg, A.A., Merwe, N.A. van der, Ferguson, Morag E.
Published 2017-08-01T11:29:00Z

Identification of a major QTL-controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis

by Chen, A., Sun, J., Martin, G., Gray, L.A., Hřibová, E., Christelova, P., Yahiaoui, N., Rounsley, S., Lyons, R., Batley, J., Chen, N., Hamill, S., Rai, K., Coin, L., Uwimana, Brigitte, D’Hont, Angélique, Doležel, J., Edwards, D., Swennen, R., Aitken, E.A.B.
Published 2023-02-13T12:05:20Z

Identification of a major QTL-Controlling resistance to the subtropical race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis

by Chen, Andrew, Sun, Jiaman, Martin, Guillaume, Gray, Lesley-Ann, Hribova, Eva, Christelová, Pavla, Yahiaoui, Nabila, Rounsley, Steve, Lyons, Rebecca, Batley, Jacqueline, Chen, Ning, Hamill, Sharon, Rai, Subash K., Coin, Lachlan, Uwimana, Brigitte, D'Hont, Angélique, Dolezel, Jaroslav, Edwards, David P., Swennen, Rony, Aitken, Elizabeth A. B.

Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity

by Bredeson, J.V., Lyons, J.B., Prochnik, S.E., Wu, G.A., Ha, C.M., Edsinger-Gonzales, E., Grimwood, J., Schmutz, J., Rabbi, Ismail Y., Egezi, C., Nauluvula, P., Lebot, V., Ndunguru, J., Mkamilo, G.S., Bart, R.S., Setter, Tim L., Gleadow, R.M., Kulakow, Peter A., Ferguson, M., Rounsley, S., Rokhsar, D.S.
Published 2016-06-23T07:46:34Z

Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity

by Bredeson, Jessen V., Lyons, Jessica B., Prochnik, Simon, Wu, Guohong Albert, Ha, Cindy M., Edsinger-Gonzales, Eric, Grimwood, Jane, Schmutz, Jeremy, Rabbi, Ismail Y., Egesi, Chiedozie, Nauluvula, Poasa, Lebot, Vincent, Ndunguru, Joseph, Mkamilo, Geoffrey, Bart, Rebecca, Setter, Tim, Gleadow, Roslyn M., Kulakow, Peter, Ferguson, Morag E., Rounsley, Steve, Rokhsar, Daniel S.

The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

by Wang, M., Yu, Y., Haberer, G., Marri, P.R., Fan, C., Goicoechea, J.L., Zuccolo, A., Song, X., Kudrna, D., Ammiraju, J.S.S., Cossu, R.M., Maldonado, C., Chen, J., Lee, S., Sisneros, N., Baynast, K. de, Golser, W., Wissotski, M., Kim, W., Sanchez, P., Ndjiondjop, M.N., Sanni, K., Long, M., Carney, J., Panaud, O., Wicker, T., Machado, C.A., Chen, M., Mayer, K.F.X., Rounsley, S., Wing, Rod A.
Published 2021-11-15T15:50:40Z

The coffee genome provides insight into the convergent evolution of caffeine biosynthesis.

by DENOEUD, F., CARRETERO-PAULET, L., DEREEPER, A., DROC, G., GUYOT, R., PIETRELLA, M., ZHENG, C., ALBERTI, A., ANTHONY, F., APREA, G., AURY, J. M., BENTO, P., BERNARD, M., BOCS, S., CAMPA, C., CENCI, A., COMBES, M. C., CROUZILLAT, D., SILVA, C. da, DADDIEGO, L., BELLIS, F. de, DUSSERT, S., GARSMEUR, O., GAYRAUD, T., GUIGNON, V., JAHN, K., JAMILLOUX, V., JOËT, T., LABADIE, K., LAN, T., LECLERCQ, J., LEPELLEY, M., LEROY, T., LI, L. T., LIBRADO, P., LOPEZ, L., MUÑOZ, A., NOEL, B., PALLAVICINI, A., PERROTTA, G., PONCET, V., POT, D., PRIYONO, RIGOREAU, M., ROUARD, M., ROZAS, J., TRANCHANT-DUBREUIL, C., VANBUREN, R., ZHANG, Q., ANDRADE, A. C., ARGOUT, X., BERTRAND, B., KOCHKO, A. de, GRAZIOSI, G., HENRY, R. J., JAYARAMA, MING, R., NAGAI, C., ROUNSLEY, S., SANKOFF, D., GIULIANO, G., ALBERT, V. A., WINCKER, P., LASHERMES, P.
Published 2015-01-22

The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

by Denoeud, France, Carretero-Paulet, Lorenzo, Dereeper, Alexis, Droc, Gaëtan, Guyot, Romain, Pietrella, Marco, Chunfang Zheng, Alberti, Adriana, Anthony, François, Aprea, Giuseppe, Aury, Jean-Marc, Bento, Pascal, Bernard, Maria, Bocs, Stéphanie, Campa, Claudine, Cenci, Alberto, Combes, Marie-Christine, Crouzillat, Dominique, Da Silva, Corinne, Daddiego, Loretta, De Bellis, Fabien, Dussert, Stéphane, Garsmeur, Olivier, Gayraud, Thomas, Guignon, Valentin, Jahn, Katharina, Jamilloux, Véronique, Joët, Thierry, Labadie, Karine, Tianying Lan, Leclercq, Julie, Lepelley, Maud, Leroy, Thierry, Lei-Ting Li, Librado, Pablo, Lopez, Loredana, Muñoz, Adriana, Noël, Benjamin, Pallavicini, Alberto, Perrotta, Gaetano, Poncet, Valérie, Pot, David, Priyono, Rigoreau, Michel, Rouard, Mathieu, Rozas, Julio, Tranchant-Dubreuil, Christine, VanBuren, Robert, Qiong Zhang, Andrade, Alan A., Argout, Xavier, Bertrand, Benoît, De Kochko, Alexandre, Graziosi, Giorgio, Henry, Robert, Jayarama, Ming, Ray, Nagai, Chifumi, Rounsley, Steve, Sankoff, David, Giuliano, Giovanni, Albert, Victor A., Wincker, Patrick, Lashermes, Philippe