Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus

by Vries, Ronald P. de, Grigoriev, Igor V., MacCabe, Andrew P., Orejas, Margarita
Published 2017-02-14

Mitovirus and Mitochondrial Coding Sequences from Basal Fungus Entomophthora muscae

by Nibert, Max L., Debat, Humberto Julio, Manny, Austin R., Grigoriev, Igor V., De Fine Licht, Henrik H.
Published 2019-04-17

AraR plays a more dominant role than XlnR in plant biomass conversion in Penicillium subrubescens

by Liu, Dujuan, Xu, Li, Peng, Mao, Lipzen, Anna, Ng, Vivian, Savage, Emily, Zhang, Yu, Grigoriev, Igor V., Garrigues, Sandra, de Vries, Ronald P.
Published 2024-08-10

Enemy or ally : a genomic approach to elucidate the lifestyle of Phyllosticta citrichinaensis

by Buijs, Valerie A., Groenewald, Johannes Z., Haridas, Sajeet, LaButti, Kurt M., Lipzen, Anna, Martin, Francis M., Barry, Kerrie, Grigoriev, Igor V., Crous, Pedro W., Seidl, Michael F.

A multiomic approach to understand how pleurotus eryngii transforms non-woody lignocellulosic material

by Peña, Ander, Babiker, Rashid, Chaduli, Delphine, Lipzen, Anna, Wang, Mei, Chovatia, Mansi, Rencoret, Jorge, Marques, Gisela, Sánchez-Ruiz, María I., Kijpornyongpan, T., Salvachúa, Davinia, Camarero, Susana, Ng, Vivian, Gutiérrez Suárez, Ana, Grigoriev, Igor V., Rosso, Marie-Noëlle, Martínez, Ángel T., Ruiz-Dueñas, F. J.
Published 2021-06

Un enfoque multiómico permite entender cómo Pleurotus eryngii transforma el material lignocelulósico no leñoso

by Peña, Ander, Babiker, Rashid, Sánchez-Ruiz, María I., Chaduli, Delphine, Lipzen, Anna, Wang, Mei, Chovatia, Mansi, Rencoret, Jorge, Marques, Gisela, Kijpornyongpan, T., Salvachúa, Davinia, Camarero, Susana, Ng, Vivian, Gutiérrez Suárez, Ana, Grigoriev, Igor V., Rosso, Marie-Noëlle, Martínez, Ángel T., Ruiz-Dueñas, F. J.
Published 2021-07

The Sugar Metabolic Model of Aspergillus niger Can Only Be Reliably Transferred to Fungi of Its Phylum

by Li, Jiajia, Chroumpi, Tania, Garrigues, Sandra, Kun, Roland S, Meng, Jiali, Salazar-Cerezo, Sonia, Aguilar-Pontes, Maria Victoria, Zhang, Yu, Tejomurthula, Sravanthi, Lipzen, Anna, Ng, Vivian, Clendinen, Chaevien S, Tolić, Nikola, Grigoriev, Igor V, Tsang, Adrian, Mäkelä, Miia R, Snel, Berend, Peng, Mao, de Vries, Ronald P
Published 2022-12-17

Phyllosticta paracitricarpa is synonymous with the EU quarantine fungus P. citricarpa based on phylogenomic analyses

by van Ingen-Buijs, Valerie A., van Westerhoven, Anouk C., Skiadas, Petros, Zuijdgeest, Xander C.L., Haridas, Sajeet, Daum, Christopher, Duffy, Kecia, Guo, Jie, Hundley, Hope, LaButti, Kurt, Lipzen, Anna, Pangilinan, Jasmyn, Riley, Robert, Wang, Jie, Yan, Mi, Martin, Francis, Barry, Kerrie, Grigoriev, Igor V., Groenewald, Johannes Z., Crous, Pedro W., Seidl, Michael F.

A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen

by Feurtey, Alice, Lorrain, Cécile, McDonald, Megan C., Milgate, Andrew, Solomon, Peter S., Warren, Rachael, Puccetti, Guido, Scalliet, Gabriel, Torriani, Stefano F.F., Gout, Lilian, Marcel, Thierry C., Suffert, Frédéric, Alassimone, Julien, Lipzen, Anna, Yoshinaga, Yuko, Daum, Christopher, Barry, Kerrie, Grigoriev, Igor V., Goodwin, Stephen B., Genissel, Anne, Seidl, Michael F., Stukenbrock, Eva H., Lebrun, Marc Henri, Kema, Gert H.J., McDonald, Bruce A., Croll, Daniel

IMA genome-F18 : The re-identification of Penicillium genomes available in NCBI and draft genomes for Penicillium species from dry cured meat, Penicillium biforme, P. brevicompactu...

by Visagie, Cobus M., Magistà, Donato, Ferrara, Massimo, Balocchi, Felipe, Duong, Tuan A., Eichmeier, Ales, Gramaje, David, Aylward, Janneke, Baker, Scott E., Barnes, Irene, Calhoun, Sara, Angelis, Maria de, Frisvad, Jens C., Hakalova, Eliska, Hayes, Richard D., Houbraken, Jos, Grigoriev, Igor V., LaButti, Kurt, Leal, Catarina, Lipzen, Anna, Ng, Vivian, Pangilinan, Jasmyn, Pecenka, Jakub, Perrone, Giancarlo, Piso, Anja, Savage, Emily, Spetik, Milan, Wingfield, Michael J., Zhang, Yu, Wingfield, Brenda D.
Published 2023-10-06

Combating a Global Threat to a Clonal Crop : Banana Black Sigatoka Pathogen Pseudocercospora fijiensis (Synonym Mycosphaerella fijiensis) Genomes Reveal Clues for Disease Control

by Arango Isaza, Rafael E., Diaz-Trujillo, Caucasella, Dhillon, Braham, Aerts, Andrea, Carlier, Jean, Crane, Charles F., V. de Jong, Tristan, de Vries, Ineke, Dietrich, Robert, Farmer, Andrew D., Fortes Fereira, Claudia, Garcia, Suzana, Guzman, Mauricio, Hamelin, Richard C., Lindquist, Erika A., Mehrabi, Rahim, Quiros, Olman, Schmutz, Jeremy, Shapiro, Harris, Reynolds, Elizabeth, Scalliet, Gabriel, Souza, Manoel, Stergiopoulos, Ioannis, van der Lee, Theo A.J., de Wit, Pierre J.G.M., Zapater, Marie Françoise, Zwiers, Lute Harm, Grigoriev, Igor V., Goodwin, Stephen B., Kema, Gert H.J.

Lifestyle Evolution And Peroxidase Diversity In Agaricales As Revealed By Comparative Genomics

by Ruiz-Dueñas, F. J., Barrasa González, José María, Sánchez-Ruiz, María I., Ayuso-Fernández, Iván, Sánchez García, Marisol, Camarero, Susana, Miyauchi, S, Serrano, Ana, Linde, Dolores, Babiker, Rashid, Rencoret, Jorge, Davó-Siguero, Irene, Drula, Elodie, Pacheco, Remedios, Padilla, Guillermo, Ferreira, Patricia, Barriuso, Jorge, Kellner, H., Castanera, Raúl, Alfaro, Manuel, Ramírez, Lucía, Pisabarro, Antonio G., Riley, Robert, Kuo, Alan, Andreopoulos, William, LaButti, Kurt M., Pangilinan, Jasmyn, Tritt, Andrew, Lipzen, Anna, He, Guifen, Yan, Mi, Gutiérrez Suárez, Ana, Romero, Antonio, Ng, Vivian, Grigoriev, Igor V., Cullen, Daniel, Martin, Francis, Rosso, Marie-Noëlle, Henrissat, Bernard, Hibbett, David S., Martínez, Ángel T.
Published 2022-07

The Earth BioGenome Project 2020: Starting the clock

by Lewin, Harris A., Richards, Stephen, Lieberman Aiden, Erez, Allende, Miguel L., Archibald, John M., Bálint, Miklós, Barker, Katharine B., Baumgartner, Bridget, Belov, Katherine, Bertorelle, Giorgio, Blaxter, Mark, Cai, Jing, Caperello, Nicolette D., Carlson, Keith, Castilla-Rubio, Juan Carlos, Chaw, Shu-Miaw, Chen, Lei, Childers, Anna K., Coddington, Jonathan A., Conde, Dalia A., Corominas, Montserrat, Crandall, Keith A., Crawford, Andrew J., DiPalma, Federica, Durbin, Richard, Ebenezer, ThankGod E., Edwards, Scott V., Fedrigo, Olivier, Flicek, Paul, Gibbs, Richard A., Gilbert, M. Thomas P., Goldstein, Melissa M., Marshall Graves, Jennifer, Greely, Henry T., Grigoriev, Igor V., Hackett, Kevin J., Hall, Neil, Haussler, David, Helgen, Kristofer M., Hogg, Carolyn J., Isobe, Sachiko, Jakobsen, Kjetill Sigurd, Janke, Axel, Jarvis, Erich D., Johnson, Warren E., Jones, Steven J. M., Kersey, Paul J., Kim, Jin-Hyoung, Kress, W. John, Kuraku, Shigehiro, Leebens-Mack, James H., Li, Xueyan, Lindblad-Toh, Kerstin, Liu, Xin, Lopez, Jose V., Marqués-Bonet, Tomàs, Mazard, Sophie, Mazet, Jonna, Mazzoni, Camila J., Myers, Eugene W., O’Neill, Rachel J., Paez, Sadye, Park, Hyun, Robinson, Gene E., Roquet, Cristina, Ryder, Oliver A., Sabir, Jamal S. M., Shaffer, H. Bradley, Shank, Thimothy M., Sherkow, Jacob S., Soltis, Pamela S., Tang, Boping
Published 2022