Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations

The genetic diversity of 277 nucleotides in the mitochondrial DNA control region (nt 15,964 to 16,240 in reference sequence) was analyzed in crossbreed beef cattle (Brangus-Ibage, 5/8 Bos primigenius taurus x 3/8 Bos primigenius indicus) as well as in some Nellore samples (B. p. indicus). Fifty-seven mutations were found in Brangus-Ibage comprising 18 haplotypes (haplotype diversity, h = 0.851 ± 0.041 and nucleotide diversity, ntd = 0.009 ± 0.006) and 66 in Nellore (h = 1.00 ± 0.27, ntd = 0.014 ± 0.012). These data indicated sequence identities of 99.6 and 92.1% between the B. p. taurus' reference sequence and Brangus-Ibage and Nellore, respectively. The comparison of our data with sequence data for 612 individuals recovered from GenBank showed a total of 205 haplotypes defined by 99 polymorphic sites. Most of the variability (53%) was due to differentiation within breeds. The phylogenetic tree constructed using the neighbor-joining method showed clearly the well-known dichotomy between B. p. taurus and B. p. indicus. The Brangus-Ibage clustered with B. p. taurus lineages; however, the displacement of Nellore from B. p. indicus branch probably indicates a substantial B. p. taurus maternal ancestry in some Nellore samples (obtained from GenBank) and reflects the primarily male-driven introduction of this breed in Brazil.

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Main Authors: Henkes,Luiz Ernani, Silva Jr,Wilson Araújo, Moraes,José Carlos Ferrugem, Weimer,Tania Azevedo
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Genética 2005
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000100011
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spelling oai:scielo:S1415-475720050001000112005-09-08Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populationsHenkes,Luiz ErnaniSilva Jr,Wilson AraújoMoraes,José Carlos FerrugemWeimer,Tania Azevedo bovine mtDNA maternal lineage sequence analysis beef cattle genetic diversity The genetic diversity of 277 nucleotides in the mitochondrial DNA control region (nt 15,964 to 16,240 in reference sequence) was analyzed in crossbreed beef cattle (Brangus-Ibage, 5/8 Bos primigenius taurus x 3/8 Bos primigenius indicus) as well as in some Nellore samples (B. p. indicus). Fifty-seven mutations were found in Brangus-Ibage comprising 18 haplotypes (haplotype diversity, h = 0.851 ± 0.041 and nucleotide diversity, ntd = 0.009 ± 0.006) and 66 in Nellore (h = 1.00 ± 0.27, ntd = 0.014 ± 0.012). These data indicated sequence identities of 99.6 and 92.1% between the B. p. taurus' reference sequence and Brangus-Ibage and Nellore, respectively. The comparison of our data with sequence data for 612 individuals recovered from GenBank showed a total of 205 haplotypes defined by 99 polymorphic sites. Most of the variability (53%) was due to differentiation within breeds. The phylogenetic tree constructed using the neighbor-joining method showed clearly the well-known dichotomy between B. p. taurus and B. p. indicus. The Brangus-Ibage clustered with B. p. taurus lineages; however, the displacement of Nellore from B. p. indicus branch probably indicates a substantial B. p. taurus maternal ancestry in some Nellore samples (obtained from GenBank) and reflects the primarily male-driven introduction of this breed in Brazil.info:eu-repo/semantics/openAccessSociedade Brasileira de GenéticaGenetics and Molecular Biology v.28 n.1 20052005-03-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000100011en10.1590/S1415-47572005000100011
institution SCIELO
collection OJS
country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
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region America del Sur
libraryname SciELO
language English
format Digital
author Henkes,Luiz Ernani
Silva Jr,Wilson Araújo
Moraes,José Carlos Ferrugem
Weimer,Tania Azevedo
spellingShingle Henkes,Luiz Ernani
Silva Jr,Wilson Araújo
Moraes,José Carlos Ferrugem
Weimer,Tania Azevedo
Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations
author_facet Henkes,Luiz Ernani
Silva Jr,Wilson Araújo
Moraes,José Carlos Ferrugem
Weimer,Tania Azevedo
author_sort Henkes,Luiz Ernani
title Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations
title_short Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations
title_full Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations
title_fullStr Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations
title_full_unstemmed Mitochondrial control region genetic diversity and maternal ancestry of a Brangus-Ibage cattle populations
title_sort mitochondrial control region genetic diversity and maternal ancestry of a brangus-ibage cattle populations
description The genetic diversity of 277 nucleotides in the mitochondrial DNA control region (nt 15,964 to 16,240 in reference sequence) was analyzed in crossbreed beef cattle (Brangus-Ibage, 5/8 Bos primigenius taurus x 3/8 Bos primigenius indicus) as well as in some Nellore samples (B. p. indicus). Fifty-seven mutations were found in Brangus-Ibage comprising 18 haplotypes (haplotype diversity, h = 0.851 ± 0.041 and nucleotide diversity, ntd = 0.009 ± 0.006) and 66 in Nellore (h = 1.00 ± 0.27, ntd = 0.014 ± 0.012). These data indicated sequence identities of 99.6 and 92.1% between the B. p. taurus' reference sequence and Brangus-Ibage and Nellore, respectively. The comparison of our data with sequence data for 612 individuals recovered from GenBank showed a total of 205 haplotypes defined by 99 polymorphic sites. Most of the variability (53%) was due to differentiation within breeds. The phylogenetic tree constructed using the neighbor-joining method showed clearly the well-known dichotomy between B. p. taurus and B. p. indicus. The Brangus-Ibage clustered with B. p. taurus lineages; however, the displacement of Nellore from B. p. indicus branch probably indicates a substantial B. p. taurus maternal ancestry in some Nellore samples (obtained from GenBank) and reflects the primarily male-driven introduction of this breed in Brazil.
publisher Sociedade Brasileira de Genética
publishDate 2005
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572005000100011
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