Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length

Camera trapping allows scientists to study activity patterns of animals under natural conditions. However, comparisons of activity patterns across seasons or latitudes can be biased, because activity is often attuned to sunrise and sunset, the timing of which varies with latitude and season. Existing transformation methods to solve this problem have limitations. Here, we explore whether and how activity patterns can be transformed more accurately using two alternative ‘double anchoring’ transformations – equinoctial and average anchoring – that anchor activity time to two chosen anchor points during the study period. Using simulated noisy datasets mimicking species with either crepuscular, diurnal or cathemeral activity patterns, we compared the ability of different transformation methods to extract the latent pattern and activity levels under different study conditions. We found that average anchoring best retrieved the original diel activity pattern and yielded accurate estimates of activity level. Two alternative transformation methods – single anchoring and equinoctial anchoring – performed less well. Bias in estimates from using untransformed clock times was most marked (up to 2.5-fold overestimation) for longer studies covering 4–5 months either side of an equinox at high latitude, and focusing on crepuscular species. We applied the average anchoring method to 9 months of data on Red deer Cervus elaphus, Wild boar Sus scrofa and Mouflon Ovis amon musimon activity as captured by camera traps in National Park Hoge Veluwe, the Netherlands. Average anchoring revealed more pronounced peaks of activity after sunset than was apparent from untransformed data in red deer and wild boar, but not for mouflon, a cathemeral species. Similarly, activity level was lower when calculated using average anchored time for red deer and wild boar, but no difference was observed for mouflon. We conclude that transformation of time might not be necessary at latitudes below 20°, or in studies with a duration of less than a month (below 40° latitude). For longer study periods and/or higher latitudes, average anchoring resolves the problem of variable day length. Code is provided. The transformation functions are incorporated in the r-package ‘activity’.

Saved in:
Bibliographic Details
Main Authors: Vazquez, Carmen, Rowcliffe, J.M., Spoelstra, Kamiel, Jansen, Patrick A.
Format: Article/Letter to editor biblioteca
Language:English
Subjects:activity level, activity pattern, camera trapping, day length, diel activity, double anchoring, equinoctial anchoring, mouflon, red deer, seasonal variation,
Online Access:https://research.wur.nl/en/publications/comparing-diel-activity-patterns-of-wildlife-across-latitudes-and
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-wur-nl-wurpubs-555679
record_format koha
spelling dig-wur-nl-wurpubs-5556792025-01-16 Vazquez, Carmen Rowcliffe, J.M. Spoelstra, Kamiel Jansen, Patrick A. Article/Letter to editor Methods in Ecology and Evolution 10 (2019) 12 ISSN: 2041-210X Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length 2019 Camera trapping allows scientists to study activity patterns of animals under natural conditions. However, comparisons of activity patterns across seasons or latitudes can be biased, because activity is often attuned to sunrise and sunset, the timing of which varies with latitude and season. Existing transformation methods to solve this problem have limitations. Here, we explore whether and how activity patterns can be transformed more accurately using two alternative ‘double anchoring’ transformations – equinoctial and average anchoring – that anchor activity time to two chosen anchor points during the study period. Using simulated noisy datasets mimicking species with either crepuscular, diurnal or cathemeral activity patterns, we compared the ability of different transformation methods to extract the latent pattern and activity levels under different study conditions. We found that average anchoring best retrieved the original diel activity pattern and yielded accurate estimates of activity level. Two alternative transformation methods – single anchoring and equinoctial anchoring – performed less well. Bias in estimates from using untransformed clock times was most marked (up to 2.5-fold overestimation) for longer studies covering 4–5 months either side of an equinox at high latitude, and focusing on crepuscular species. We applied the average anchoring method to 9 months of data on Red deer Cervus elaphus, Wild boar Sus scrofa and Mouflon Ovis amon musimon activity as captured by camera traps in National Park Hoge Veluwe, the Netherlands. Average anchoring revealed more pronounced peaks of activity after sunset than was apparent from untransformed data in red deer and wild boar, but not for mouflon, a cathemeral species. Similarly, activity level was lower when calculated using average anchored time for red deer and wild boar, but no difference was observed for mouflon. We conclude that transformation of time might not be necessary at latitudes below 20°, or in studies with a duration of less than a month (below 40° latitude). For longer study periods and/or higher latitudes, average anchoring resolves the problem of variable day length. Code is provided. The transformation functions are incorporated in the r-package ‘activity’. en application/pdf https://research.wur.nl/en/publications/comparing-diel-activity-patterns-of-wildlife-across-latitudes-and 10.1111/2041-210X.13290 https://edepot.wur.nl/506244 activity level activity pattern camera trapping day length diel activity double anchoring equinoctial anchoring mouflon red deer seasonal variation https://creativecommons.org/licenses/by/4.0/ Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
language English
topic activity level
activity pattern
camera trapping
day length
diel activity
double anchoring
equinoctial anchoring
mouflon
red deer
seasonal variation
activity level
activity pattern
camera trapping
day length
diel activity
double anchoring
equinoctial anchoring
mouflon
red deer
seasonal variation
spellingShingle activity level
activity pattern
camera trapping
day length
diel activity
double anchoring
equinoctial anchoring
mouflon
red deer
seasonal variation
activity level
activity pattern
camera trapping
day length
diel activity
double anchoring
equinoctial anchoring
mouflon
red deer
seasonal variation
Vazquez, Carmen
Rowcliffe, J.M.
Spoelstra, Kamiel
Jansen, Patrick A.
Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length
description Camera trapping allows scientists to study activity patterns of animals under natural conditions. However, comparisons of activity patterns across seasons or latitudes can be biased, because activity is often attuned to sunrise and sunset, the timing of which varies with latitude and season. Existing transformation methods to solve this problem have limitations. Here, we explore whether and how activity patterns can be transformed more accurately using two alternative ‘double anchoring’ transformations – equinoctial and average anchoring – that anchor activity time to two chosen anchor points during the study period. Using simulated noisy datasets mimicking species with either crepuscular, diurnal or cathemeral activity patterns, we compared the ability of different transformation methods to extract the latent pattern and activity levels under different study conditions. We found that average anchoring best retrieved the original diel activity pattern and yielded accurate estimates of activity level. Two alternative transformation methods – single anchoring and equinoctial anchoring – performed less well. Bias in estimates from using untransformed clock times was most marked (up to 2.5-fold overestimation) for longer studies covering 4–5 months either side of an equinox at high latitude, and focusing on crepuscular species. We applied the average anchoring method to 9 months of data on Red deer Cervus elaphus, Wild boar Sus scrofa and Mouflon Ovis amon musimon activity as captured by camera traps in National Park Hoge Veluwe, the Netherlands. Average anchoring revealed more pronounced peaks of activity after sunset than was apparent from untransformed data in red deer and wild boar, but not for mouflon, a cathemeral species. Similarly, activity level was lower when calculated using average anchored time for red deer and wild boar, but no difference was observed for mouflon. We conclude that transformation of time might not be necessary at latitudes below 20°, or in studies with a duration of less than a month (below 40° latitude). For longer study periods and/or higher latitudes, average anchoring resolves the problem of variable day length. Code is provided. The transformation functions are incorporated in the r-package ‘activity’.
format Article/Letter to editor
topic_facet activity level
activity pattern
camera trapping
day length
diel activity
double anchoring
equinoctial anchoring
mouflon
red deer
seasonal variation
author Vazquez, Carmen
Rowcliffe, J.M.
Spoelstra, Kamiel
Jansen, Patrick A.
author_facet Vazquez, Carmen
Rowcliffe, J.M.
Spoelstra, Kamiel
Jansen, Patrick A.
author_sort Vazquez, Carmen
title Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length
title_short Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length
title_full Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length
title_fullStr Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length
title_full_unstemmed Comparing diel activity patterns of wildlife across latitudes and seasons: Time transformations using day length
title_sort comparing diel activity patterns of wildlife across latitudes and seasons: time transformations using day length
url https://research.wur.nl/en/publications/comparing-diel-activity-patterns-of-wildlife-across-latitudes-and
work_keys_str_mv AT vazquezcarmen comparingdielactivitypatternsofwildlifeacrosslatitudesandseasonstimetransformationsusingdaylength
AT rowcliffejm comparingdielactivitypatternsofwildlifeacrosslatitudesandseasonstimetransformationsusingdaylength
AT spoelstrakamiel comparingdielactivitypatternsofwildlifeacrosslatitudesandseasonstimetransformationsusingdaylength
AT jansenpatricka comparingdielactivitypatternsofwildlifeacrosslatitudesandseasonstimetransformationsusingdaylength
_version_ 1822268670588485632