Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators

The transition from vegetative to reproductive development is one of the most important phase changes in the plant life cycle. This step is controlled by various environmental signals that are integrated at the molecular level by so-called floral integrators. One such floral integrator in Arabidopsis (Arabidopsis thaliana) is the MADS domain transcription factor SUPPRESSOR OF OVEREXPRESSION OF CONSTANS1 (SOC1). Despite extensive genetic studies, little is known about the transcriptional control of SOC1, and we are just starting to explore the network of genes under the direct control of SOC1 transcription factor complexes. Here, we show that several MADS domain proteins, including SOC1 heterodimers, are able to bind SOC1 regulatory sequences. Genome-wide target gene analysis by ChIP-seq confirmed the binding of SOC1 to its own locus and shows that it also binds to a plethora of flowering-time regulatory and floral homeotic genes. In turn, the encoded floral homeotic MADS domain proteins appear to bind SOC1 regulatory sequences. Subsequent in planta analyses revealed SOC1 repression by several floral homeotic MADS domain proteins, and we show that, mechanistically, this depends on the presence of the SOC1 protein. Together, our data show that SOC1 constitutes a major hub in the regulatory networks underlying floral timing and flower development and that these networks are composed of many positive and negative autoregulatory and feedback loops. The latter seems to be crucial for the generation of a robust flower-inducing signal, followed shortly after by repression of the SOC1 floral integrator.

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Main Authors: Immink, G.H., Posé, D., Ferrario, S.I.T., Ott, F., Kaufmann, K., Valentim, F.L., de Folter, S., van der Wal, F., van Dijk, A.D.J., Schmid, M., Angenent, G.C.
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Published: Max Planck Institute for Developmental Biology
Subjects:Arabidopsis thaliana,
Online Access:https://research.wur.nl/en/datasets/characterization-of-soc1s-central-role-in-flowering-by-the-identi
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spelling dig-wur-nl-wurpubs-5205042025-01-10 Immink, G.H. Posé, D. Ferrario, S.I.T. Ott, F. Kaufmann, K. Valentim, F.L. de Folter, S. van der Wal, F. van Dijk, A.D.J. Schmid, M. Angenent, G.C. Dataset Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators 2016 The transition from vegetative to reproductive development is one of the most important phase changes in the plant life cycle. This step is controlled by various environmental signals that are integrated at the molecular level by so-called floral integrators. One such floral integrator in Arabidopsis (Arabidopsis thaliana) is the MADS domain transcription factor SUPPRESSOR OF OVEREXPRESSION OF CONSTANS1 (SOC1). Despite extensive genetic studies, little is known about the transcriptional control of SOC1, and we are just starting to explore the network of genes under the direct control of SOC1 transcription factor complexes. Here, we show that several MADS domain proteins, including SOC1 heterodimers, are able to bind SOC1 regulatory sequences. Genome-wide target gene analysis by ChIP-seq confirmed the binding of SOC1 to its own locus and shows that it also binds to a plethora of flowering-time regulatory and floral homeotic genes. In turn, the encoded floral homeotic MADS domain proteins appear to bind SOC1 regulatory sequences. Subsequent in planta analyses revealed SOC1 repression by several floral homeotic MADS domain proteins, and we show that, mechanistically, this depends on the presence of the SOC1 protein. Together, our data show that SOC1 constitutes a major hub in the regulatory networks underlying floral timing and flower development and that these networks are composed of many positive and negative autoregulatory and feedback loops. The latter seems to be crucial for the generation of a robust flower-inducing signal, followed shortly after by repression of the SOC1 floral integrator. Max Planck Institute for Developmental Biology text/html https://research.wur.nl/en/datasets/characterization-of-soc1s-central-role-in-flowering-by-the-identi https://edepot.wur.nl/415382 Arabidopsis thaliana Wageningen University & Research
institution WUR NL
collection DSpace
country Países bajos
countrycode NL
component Bibliográfico
access En linea
databasecode dig-wur-nl
tag biblioteca
region Europa del Oeste
libraryname WUR Library Netherlands
topic Arabidopsis thaliana
Arabidopsis thaliana
spellingShingle Arabidopsis thaliana
Arabidopsis thaliana
Immink, G.H.
Posé, D.
Ferrario, S.I.T.
Ott, F.
Kaufmann, K.
Valentim, F.L.
de Folter, S.
van der Wal, F.
van Dijk, A.D.J.
Schmid, M.
Angenent, G.C.
Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators
description The transition from vegetative to reproductive development is one of the most important phase changes in the plant life cycle. This step is controlled by various environmental signals that are integrated at the molecular level by so-called floral integrators. One such floral integrator in Arabidopsis (Arabidopsis thaliana) is the MADS domain transcription factor SUPPRESSOR OF OVEREXPRESSION OF CONSTANS1 (SOC1). Despite extensive genetic studies, little is known about the transcriptional control of SOC1, and we are just starting to explore the network of genes under the direct control of SOC1 transcription factor complexes. Here, we show that several MADS domain proteins, including SOC1 heterodimers, are able to bind SOC1 regulatory sequences. Genome-wide target gene analysis by ChIP-seq confirmed the binding of SOC1 to its own locus and shows that it also binds to a plethora of flowering-time regulatory and floral homeotic genes. In turn, the encoded floral homeotic MADS domain proteins appear to bind SOC1 regulatory sequences. Subsequent in planta analyses revealed SOC1 repression by several floral homeotic MADS domain proteins, and we show that, mechanistically, this depends on the presence of the SOC1 protein. Together, our data show that SOC1 constitutes a major hub in the regulatory networks underlying floral timing and flower development and that these networks are composed of many positive and negative autoregulatory and feedback loops. The latter seems to be crucial for the generation of a robust flower-inducing signal, followed shortly after by repression of the SOC1 floral integrator.
format Dataset
topic_facet Arabidopsis thaliana
author Immink, G.H.
Posé, D.
Ferrario, S.I.T.
Ott, F.
Kaufmann, K.
Valentim, F.L.
de Folter, S.
van der Wal, F.
van Dijk, A.D.J.
Schmid, M.
Angenent, G.C.
author_facet Immink, G.H.
Posé, D.
Ferrario, S.I.T.
Ott, F.
Kaufmann, K.
Valentim, F.L.
de Folter, S.
van der Wal, F.
van Dijk, A.D.J.
Schmid, M.
Angenent, G.C.
author_sort Immink, G.H.
title Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators
title_short Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators
title_full Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators
title_fullStr Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators
title_full_unstemmed Characterization of SOC1’s central role in flowering by the identification of its upstream and downstream regulators
title_sort characterization of soc1’s central role in flowering by the identification of its upstream and downstream regulators
publisher Max Planck Institute for Developmental Biology
url https://research.wur.nl/en/datasets/characterization-of-soc1s-central-role-in-flowering-by-the-identi
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