New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing

High-throughput DNA methods hold great promise for the study of the hyperdiverse arthropod fauna of the soil. We used the mitochondrial metagenomic approach to generate 39 mitochondrial genomes from adult and larval specimens of Coleoptera collected from soil samples. The mitogenomes correspond to species from the families Carabidae (6), Chrysomelidae (1), Curculionidae (9), Dermestidae (1), Elateridae (1), Latridiidae (1), Scarabaeidae (3), Silvanidae (1), Staphylinidae (12), and Tenebrionidae (4). All the mitogenomes followed the putative ancestral gene order for Coleoptera. We provide the first available mitogenome for 30 genera of Coleoptera, including endogean representatives of the genera Torneuma, Coiffaitiella, Otiorhynchus, Oligotyphlopsis, and Typhlocharis.

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Bibliographic Details
Main Authors: Andújar, Carmelo, Arribas, Paula, Motyka, Michal, Bocek, Mathew, Bocak, Ladislav, Linard, Benjamin, Vogler, Alfried P.
Other Authors: Ministerio de Economía y Competitividad (España)
Format: artículo biblioteca
Published: Taylor & Francis 2019-07-12
Subjects:Endogean, Next-generation sequencing, Mitochondrial metagenomics, Coleoptera, Soil,
Online Access:http://hdl.handle.net/10261/193168
http://dx.doi.org/10.13039/501100003329
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spelling dig-ipna-es-10261-1931682021-12-28T16:02:36Z New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing Andújar, Carmelo Arribas, Paula Motyka, Michal Bocek, Mathew Bocak, Ladislav Linard, Benjamin Vogler, Alfried P. Ministerio de Economía y Competitividad (España) Endogean Next-generation sequencing Mitochondrial metagenomics Coleoptera Soil High-throughput DNA methods hold great promise for the study of the hyperdiverse arthropod fauna of the soil. We used the mitochondrial metagenomic approach to generate 39 mitochondrial genomes from adult and larval specimens of Coleoptera collected from soil samples. The mitogenomes correspond to species from the families Carabidae (6), Chrysomelidae (1), Curculionidae (9), Dermestidae (1), Elateridae (1), Latridiidae (1), Scarabaeidae (3), Silvanidae (1), Staphylinidae (12), and Tenebrionidae (4). All the mitogenomes followed the putative ancestral gene order for Coleoptera. We provide the first available mitogenome for 30 genera of Coleoptera, including endogean representatives of the genera Torneuma, Coiffaitiella, Otiorhynchus, Oligotyphlopsis, and Typhlocharis. The study was funded by the NHM Biodiversity Initiative (UK) and the Spanish Ministry of Economy and Competitiveness (Ministerio de Economía y Competitividad) under a project with the number CGL2015-74178-JIN. Peer Reviewed 2019-10-22T15:18:20Z 2019-10-22T15:18:20Z 2019-07-12 2019-10-22T15:18:20Z artículo http://purl.org/coar/resource_type/c_6501 doi: 10.1080/23802359.2019.1637289 issn: 2380-2359 Mitochondrial DNA Part B 4(2): 2447-2450 (2019) http://hdl.handle.net/10261/193168 10.1080/23802359.2019.1637289 http://dx.doi.org/10.13039/501100003329 33365580 #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/CGL2015-74178-JIN Publisher's version https://doi.org/10.1080/23802359.2019.1637289 Sí open Taylor & Francis
institution IPNA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-ipna-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IPNA España
topic Endogean
Next-generation sequencing
Mitochondrial metagenomics
Coleoptera
Soil
Endogean
Next-generation sequencing
Mitochondrial metagenomics
Coleoptera
Soil
spellingShingle Endogean
Next-generation sequencing
Mitochondrial metagenomics
Coleoptera
Soil
Endogean
Next-generation sequencing
Mitochondrial metagenomics
Coleoptera
Soil
Andújar, Carmelo
Arribas, Paula
Motyka, Michal
Bocek, Mathew
Bocak, Ladislav
Linard, Benjamin
Vogler, Alfried P.
New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing
description High-throughput DNA methods hold great promise for the study of the hyperdiverse arthropod fauna of the soil. We used the mitochondrial metagenomic approach to generate 39 mitochondrial genomes from adult and larval specimens of Coleoptera collected from soil samples. The mitogenomes correspond to species from the families Carabidae (6), Chrysomelidae (1), Curculionidae (9), Dermestidae (1), Elateridae (1), Latridiidae (1), Scarabaeidae (3), Silvanidae (1), Staphylinidae (12), and Tenebrionidae (4). All the mitogenomes followed the putative ancestral gene order for Coleoptera. We provide the first available mitogenome for 30 genera of Coleoptera, including endogean representatives of the genera Torneuma, Coiffaitiella, Otiorhynchus, Oligotyphlopsis, and Typhlocharis.
author2 Ministerio de Economía y Competitividad (España)
author_facet Ministerio de Economía y Competitividad (España)
Andújar, Carmelo
Arribas, Paula
Motyka, Michal
Bocek, Mathew
Bocak, Ladislav
Linard, Benjamin
Vogler, Alfried P.
format artículo
topic_facet Endogean
Next-generation sequencing
Mitochondrial metagenomics
Coleoptera
Soil
author Andújar, Carmelo
Arribas, Paula
Motyka, Michal
Bocek, Mathew
Bocak, Ladislav
Linard, Benjamin
Vogler, Alfried P.
author_sort Andújar, Carmelo
title New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing
title_short New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing
title_full New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing
title_fullStr New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing
title_full_unstemmed New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing
title_sort new mitochondrial genomes of 39 soil dwelling coleoptera from metagenome sequencing
publisher Taylor & Francis
publishDate 2019-07-12
url http://hdl.handle.net/10261/193168
http://dx.doi.org/10.13039/501100003329
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