Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru

Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.

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Main Authors: Paredes Espinosa, Richard, Gutiérrez Reynoso, Dina Lida, Atoche Garay, Diego Fernando, Abad Romaní, Yudi Gertrudis, Girón Aguilar, Rita Carolina, Flores Torres, Itala, Montañez Artica, Ana Gabriela, Arbizu Berrocal, Carlos Irvin, Amasifuen Guerra, Carlos Alberto, Poemape Tuesta, Carlos Augusto, Guerrero Abad, Juan Carlos
Format: info:eu-repo/semantics/workingPaper biblioteca
Language:eng
Published: John Wiley & Sons Inc.
Subjects:INIA-CGC, INIA´s coffee germplasm collection, ANOVA, analysis of variance, GCV, genotypic coefficient of variation, PCV, phenotypic coefficient of variation, https://purl.org/pe-repo/ocde/ford#4.01.06, Phenotypic variation, Genotypes, Coffee, Variación fenotípica, Genotipos, Café,
Online Access:https://hdl.handle.net/20.500.12955/2171
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spelling dig-inia-pe-20.500.12955-21712023-09-22T01:20:23Z Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru Paredes Espinosa, Richard Gutiérrez Reynoso, Dina Lida Atoche Garay, Diego Fernando Abad Romaní, Yudi Gertrudis Girón Aguilar, Rita Carolina Flores Torres, Itala Montañez Artica, Ana Gabriela Arbizu Berrocal, Carlos Irvin Amasifuen Guerra, Carlos Alberto Poemape Tuesta, Carlos Augusto Guerrero Abad, Juan Carlos INIA-CGC, INIA´s coffee germplasm collection ANOVA, analysis of variance GCV, genotypic coefficient of variation PCV, phenotypic coefficient of variation https://purl.org/pe-repo/ocde/ford#4.01.06 Phenotypic variation Genotypes Coffee Variación fenotípica Genotipos Café Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance. 2023-04-04 info:eu-repo/semantics/workingPaper https://hdl.handle.net/20.500.12955/2171 eng Crop science info:eu-repo/semantics/embargoedAccess application/pdf John Wiley & Sons Inc. Instituto Nacional de Innovación Agraria Repositorio Institucional - INIA
institution INIA PE
collection DSpace
country Perú
countrycode PE
component Bibliográfico
access En linea
databasecode dig-inia-pe
tag biblioteca
region America del Sur
libraryname Biblioteca del INIA Perú
language eng
topic INIA-CGC, INIA´s coffee germplasm collection
ANOVA, analysis of variance
GCV, genotypic coefficient of variation
PCV, phenotypic coefficient of variation
https://purl.org/pe-repo/ocde/ford#4.01.06
Phenotypic variation
Genotypes
Coffee
Variación fenotípica
Genotipos
Café
INIA-CGC, INIA´s coffee germplasm collection
ANOVA, analysis of variance
GCV, genotypic coefficient of variation
PCV, phenotypic coefficient of variation
https://purl.org/pe-repo/ocde/ford#4.01.06
Phenotypic variation
Genotypes
Coffee
Variación fenotípica
Genotipos
Café
spellingShingle INIA-CGC, INIA´s coffee germplasm collection
ANOVA, analysis of variance
GCV, genotypic coefficient of variation
PCV, phenotypic coefficient of variation
https://purl.org/pe-repo/ocde/ford#4.01.06
Phenotypic variation
Genotypes
Coffee
Variación fenotípica
Genotipos
Café
INIA-CGC, INIA´s coffee germplasm collection
ANOVA, analysis of variance
GCV, genotypic coefficient of variation
PCV, phenotypic coefficient of variation
https://purl.org/pe-repo/ocde/ford#4.01.06
Phenotypic variation
Genotypes
Coffee
Variación fenotípica
Genotipos
Café
Paredes Espinosa, Richard
Gutiérrez Reynoso, Dina Lida
Atoche Garay, Diego Fernando
Abad Romaní, Yudi Gertrudis
Girón Aguilar, Rita Carolina
Flores Torres, Itala
Montañez Artica, Ana Gabriela
Arbizu Berrocal, Carlos Irvin
Amasifuen Guerra, Carlos Alberto
Poemape Tuesta, Carlos Augusto
Guerrero Abad, Juan Carlos
Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
description Coffee (Coffea arabica L.) plays a major role in the economy of Peru and the world. The present study aims to elucidate the agro-morphological variability of coffee genotypes maintained in the INIA´s germplasm collection. Therefore, 20 vegetative, reproductive, and phytosanitary traits of 162 coffee accessions of INIA’s germplasm collection were evaluated and analyzed. Correlation results indicate that a simultaneous selection of characters, such as number of branches per plant, number of nodes per branch, leaf area and weight of a hundred fruits, can contribute to increase coffee yields. Additionally, coffee yield was negatively correlated with the incidence and severity of coffee leaf rust, and interestingly the occurrence of small and compact coffee plants with high resistance to the disease was also found. The analysis of Tocher and Mahalanobis D2 determined the formation of 10 groups of divergent coffee accessions; where clusters 1 (accession codes 20, 29, 38, 54, 67, 71, 117, 24, 26 and 27), 5 (accession codes 46 and 53), 9 (accession code 159), and 10 (accession code 203) group promising accessions that can be used in breeding programs. Principal component analysis (PCA) showed that at least five of its principal components managed to explain 70.01% of the total variation in the collection. Finally, the high coefficients obtained for the phenotypic, genotypic and heritability variation confirm the existence of additive genes in the evaluated population, that would ensure the success of coffee breeding programs based on the selection of traits of agronomic importance.
format info:eu-repo/semantics/workingPaper
topic_facet INIA-CGC, INIA´s coffee germplasm collection
ANOVA, analysis of variance
GCV, genotypic coefficient of variation
PCV, phenotypic coefficient of variation
https://purl.org/pe-repo/ocde/ford#4.01.06
Phenotypic variation
Genotypes
Coffee
Variación fenotípica
Genotipos
Café
author Paredes Espinosa, Richard
Gutiérrez Reynoso, Dina Lida
Atoche Garay, Diego Fernando
Abad Romaní, Yudi Gertrudis
Girón Aguilar, Rita Carolina
Flores Torres, Itala
Montañez Artica, Ana Gabriela
Arbizu Berrocal, Carlos Irvin
Amasifuen Guerra, Carlos Alberto
Poemape Tuesta, Carlos Augusto
Guerrero Abad, Juan Carlos
author_facet Paredes Espinosa, Richard
Gutiérrez Reynoso, Dina Lida
Atoche Garay, Diego Fernando
Abad Romaní, Yudi Gertrudis
Girón Aguilar, Rita Carolina
Flores Torres, Itala
Montañez Artica, Ana Gabriela
Arbizu Berrocal, Carlos Irvin
Amasifuen Guerra, Carlos Alberto
Poemape Tuesta, Carlos Augusto
Guerrero Abad, Juan Carlos
author_sort Paredes Espinosa, Richard
title Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
title_short Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
title_full Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
title_fullStr Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
title_full_unstemmed Agro-morphological characterization and diversity analysis of Coffea arabica germplasm collection from INIA, Peru
title_sort agro-morphological characterization and diversity analysis of coffea arabica germplasm collection from inia, peru
publisher John Wiley & Sons Inc.
url https://hdl.handle.net/20.500.12955/2171
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