Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)

AFLPs were used to characterize 67 different grapevine accessions from a collection of D.O.Ca. Rioja in Spain. A correct selection of primers and selective nucleotides allowed us to maximize the number of amplified fragments analyzed per reaction yielding an average of 100 per reaction, 49% of which were polymorphic. Based on the presence or absence of amplified fragments for each genotype resulting from a reaction with two primer combinations, we have established the genetic similarity between the different accessions in the collection. These results allowed us to resolve different genotypes maintained under the same name (homonyms) and to identify the same genotype under different names (synonyms) thus permitting the elimination of redundant germplasm. Furthermore, by providing information on more than 50 polymorphic loci per reaction, a few reactions were sufficient to identify distinct AFLP patterns characteristic of specific clones, with different agronomic and organoleptic features, belonging to the same cultivar. The possibility for clonal identification, shown here for grapevines, can have important implications in the protection and management of clonal selections.

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Main Authors: Cervera, M. T., Cabezas, J. A., Sancha, J. C., Martínez de Toda, F., Martínez-Zapater, J. M.
Format: journal article biblioteca
Language:eng
Published: 1998
Online Access:http://hdl.handle.net/20.500.12792/5844
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spelling dig-inia-es-20.500.12792-58442020-12-15T09:55:06Z Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain) Cervera, M. T. Cabezas, J. A. Sancha, J. C. Martínez de Toda, F. Martínez-Zapater, J. M. AFLPs were used to characterize 67 different grapevine accessions from a collection of D.O.Ca. Rioja in Spain. A correct selection of primers and selective nucleotides allowed us to maximize the number of amplified fragments analyzed per reaction yielding an average of 100 per reaction, 49% of which were polymorphic. Based on the presence or absence of amplified fragments for each genotype resulting from a reaction with two primer combinations, we have established the genetic similarity between the different accessions in the collection. These results allowed us to resolve different genotypes maintained under the same name (homonyms) and to identify the same genotype under different names (synonyms) thus permitting the elimination of redundant germplasm. Furthermore, by providing information on more than 50 polymorphic loci per reaction, a few reactions were sufficient to identify distinct AFLP patterns characteristic of specific clones, with different agronomic and organoleptic features, belonging to the same cultivar. The possibility for clonal identification, shown here for grapevines, can have important implications in the protection and management of clonal selections. 2020-10-22T21:27:24Z 2020-10-22T21:27:24Z 1998 journal article http://hdl.handle.net/20.500.12792/5844 10.1007/s001220050866 eng Attribution-NonCommercial-ShareAlike 4.0 International http://creativecommons.org/licenses/by-nc-sa/4.0/ open access
institution INIA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
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region Europa del Sur
libraryname Biblioteca del INIA España
language eng
description AFLPs were used to characterize 67 different grapevine accessions from a collection of D.O.Ca. Rioja in Spain. A correct selection of primers and selective nucleotides allowed us to maximize the number of amplified fragments analyzed per reaction yielding an average of 100 per reaction, 49% of which were polymorphic. Based on the presence or absence of amplified fragments for each genotype resulting from a reaction with two primer combinations, we have established the genetic similarity between the different accessions in the collection. These results allowed us to resolve different genotypes maintained under the same name (homonyms) and to identify the same genotype under different names (synonyms) thus permitting the elimination of redundant germplasm. Furthermore, by providing information on more than 50 polymorphic loci per reaction, a few reactions were sufficient to identify distinct AFLP patterns characteristic of specific clones, with different agronomic and organoleptic features, belonging to the same cultivar. The possibility for clonal identification, shown here for grapevines, can have important implications in the protection and management of clonal selections.
format journal article
author Cervera, M. T.
Cabezas, J. A.
Sancha, J. C.
Martínez de Toda, F.
Martínez-Zapater, J. M.
spellingShingle Cervera, M. T.
Cabezas, J. A.
Sancha, J. C.
Martínez de Toda, F.
Martínez-Zapater, J. M.
Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)
author_facet Cervera, M. T.
Cabezas, J. A.
Sancha, J. C.
Martínez de Toda, F.
Martínez-Zapater, J. M.
author_sort Cervera, M. T.
title Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)
title_short Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)
title_full Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)
title_fullStr Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)
title_full_unstemmed Application of AFLPS to the characterization of grapevine Vitis vinifera L. genetic resources. A case study with accessions from Rioja (Spain)
title_sort application of aflps to the characterization of grapevine vitis vinifera l. genetic resources. a case study with accessions from rioja (spain)
publishDate 1998
url http://hdl.handle.net/20.500.12792/5844
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