Fast biofoundries: coping with the challenges of biomanufacturing

Biofoundries are highly automated facilities that enable the rapid and efficient design, build, test, and learn cycle of biomanufacturing and engineering biology, which is applicable to both research and industrial production. However, developing a biofoundry platform can be expensive and time consuming. A biofoundry should grow organically, starting from a basic platform but with a vision for automation, equipment interoperability, and efficiency. By thinking about strategies early in the process through process planning, simulation, and optimization, bottlenecks can be identified and resolved. Here, we provide a survey of technological solutions in biofoundries and their advantages and limitations. We explore possible pathways towards the creation of a functional, early-phase biofoundry, and strategies towards long-term sustainability.

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Main Authors: Tellechea-Luzardo, Jonathan, Otero-Muras, Irene, Goñi-Moreno, Ángel, Carbonell-Bejerano, Pablo
Other Authors: Manchester Synthetic Biology Research Centre for Fine and Speciality Chemicals
Format: artículo de revisión biblioteca
Language:English
Published: Elsevier 2022-07
Subjects:Biocomputation, Engineering biology, Laboratory automation, Biofoundry,
Online Access:http://hdl.handle.net/10261/274871
http://dx.doi.org/10.13039/100012818
http://dx.doi.org/10.13039/501100011033
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100003329
https://api.elsevier.com/content/abstract/scopus_id/85122499084
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record_format koha
institution INIA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-inia-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del INIA España
language English
topic Biocomputation
Engineering biology
Laboratory automation
Biofoundry
Biocomputation
Engineering biology
Laboratory automation
Biofoundry
spellingShingle Biocomputation
Engineering biology
Laboratory automation
Biofoundry
Biocomputation
Engineering biology
Laboratory automation
Biofoundry
Tellechea-Luzardo, Jonathan
Otero-Muras, Irene
Goñi-Moreno, Ángel
Carbonell-Bejerano, Pablo
Fast biofoundries: coping with the challenges of biomanufacturing
description Biofoundries are highly automated facilities that enable the rapid and efficient design, build, test, and learn cycle of biomanufacturing and engineering biology, which is applicable to both research and industrial production. However, developing a biofoundry platform can be expensive and time consuming. A biofoundry should grow organically, starting from a basic platform but with a vision for automation, equipment interoperability, and efficiency. By thinking about strategies early in the process through process planning, simulation, and optimization, bottlenecks can be identified and resolved. Here, we provide a survey of technological solutions in biofoundries and their advantages and limitations. We explore possible pathways towards the creation of a functional, early-phase biofoundry, and strategies towards long-term sustainability.
author2 Manchester Synthetic Biology Research Centre for Fine and Speciality Chemicals
author_facet Manchester Synthetic Biology Research Centre for Fine and Speciality Chemicals
Tellechea-Luzardo, Jonathan
Otero-Muras, Irene
Goñi-Moreno, Ángel
Carbonell-Bejerano, Pablo
format artículo de revisión
topic_facet Biocomputation
Engineering biology
Laboratory automation
Biofoundry
author Tellechea-Luzardo, Jonathan
Otero-Muras, Irene
Goñi-Moreno, Ángel
Carbonell-Bejerano, Pablo
author_sort Tellechea-Luzardo, Jonathan
title Fast biofoundries: coping with the challenges of biomanufacturing
title_short Fast biofoundries: coping with the challenges of biomanufacturing
title_full Fast biofoundries: coping with the challenges of biomanufacturing
title_fullStr Fast biofoundries: coping with the challenges of biomanufacturing
title_full_unstemmed Fast biofoundries: coping with the challenges of biomanufacturing
title_sort fast biofoundries: coping with the challenges of biomanufacturing
publisher Elsevier
publishDate 2022-07
url http://hdl.handle.net/10261/274871
http://dx.doi.org/10.13039/100012818
http://dx.doi.org/10.13039/501100011033
http://dx.doi.org/10.13039/501100000780
http://dx.doi.org/10.13039/501100003329
https://api.elsevier.com/content/abstract/scopus_id/85122499084
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AT oteromurasirene fastbiofoundriescopingwiththechallengesofbiomanufacturing
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AT carbonellbejeranopablo fastbiofoundriescopingwiththechallengesofbiomanufacturing
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spelling dig-inia-es-10261-2748712024-10-28T21:44:56Z Fast biofoundries: coping with the challenges of biomanufacturing Tellechea-Luzardo, Jonathan Otero-Muras, Irene Goñi-Moreno, Ángel Carbonell-Bejerano, Pablo Manchester Synthetic Biology Research Centre for Fine and Speciality Chemicals Ministerio de Universidades (España) Comunidad de Madrid Agencia Estatal de Investigación (España) Universidad Politécnica de Valencia Ministerio de Ciencia, Innovación y Universidades (España) Ministerio de Economía y Competitividad (España) European Commission Tellechea-Luzardo, Jonathan [0000-0003-2198-4558] Otero-Muras, Irene [0000-0003-2895-997X] Goñi-Moreno, Angel [0000-0002-2097-2507] Carbonell-Bejerano, Pablo [0000-0002-0993-5625] Consejo Superior de Investigaciones Científicas [https://ror.org/02gfc7t72] Biocomputation Engineering biology Laboratory automation Biofoundry Biofoundries are highly automated facilities that enable the rapid and efficient design, build, test, and learn cycle of biomanufacturing and engineering biology, which is applicable to both research and industrial production. However, developing a biofoundry platform can be expensive and time consuming. A biofoundry should grow organically, starting from a basic platform but with a vision for automation, equipment interoperability, and efficiency. By thinking about strategies early in the process through process planning, simulation, and optimization, bottlenecks can be identified and resolved. Here, we provide a survey of technological solutions in biofoundries and their advantages and limitations. We explore possible pathways towards the creation of a functional, early-phase biofoundry, and strategies towards long-term sustainability. The authors thank Dr Rosalind Le Feuvre, Manchester SYNBIOCHEM Centre, for providing insightful discussions. J.T.-L. was supported by the Next Generation EU (NGEU) fund through the Spanish Recovery, Transformation and Resilience Plan via a Margarita Salas personal grant from the Spanish Ministry of Universities (UNI/551/2021). I.O.-M. was supported by CSIC intramural project PIE 20211CT006. A.G.-M. was supported by the grants BioSinT-CM (Y2020/TCS-6555) and CONTEXT (Atracción de Talento Program; 2019-T1/BIO-14053) Projects of the Comunidad de Madrid, MULTI-SYSBIO (PID2020-117205GA-I00), and the Severo Ochoa Program for Centres of Excellence in R&D (SEV-2016-0672) (2017–2021) from Ministe. P.C. was supported by MCIN/AEI/10.13039/501100011033 BIODYNAMICS grant number PID2020-117271RB-C21, and Universitat Politécnica de València Talento Programme. Peer reviewed 2022-07-06T07:44:03Z 2022-07-06T07:44:03Z 2022-07 artículo de revisión http://purl.org/coar/resource_type/c_dcae04bc Trends in Biotechnology 40(7): 831-842(2022) 0167-7799 http://hdl.handle.net/10261/274871 10.1016/j.tibtech.2021.12.006 http://dx.doi.org/10.13039/100012818 http://dx.doi.org/10.13039/501100011033 http://dx.doi.org/10.13039/501100000780 http://dx.doi.org/10.13039/501100003329 35012773 2-s2.0-85122499084 https://api.elsevier.com/content/abstract/scopus_id/85122499084 en #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MIU//UNI/551/2021 info:eu-repo/grantAgreement/CSIC//PIE 20211CT006 S2020/TCS-6555/ BioSinT-CM S2019-T1/BIO-14053/CONTEXT info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-117205GA-I00/ES/IMPLEMENTAR RELACIONES SOCIALES EN SISTEMAS MULTICELULARES SINTETICOS PARA ALCANZAR BIOCOMPUTACIONES ROBUSTAS Y FIABLES / info:eu-repo/grantAgreement/AEI/Plan Estatal de Investigación Científica y Técnica y de Innovación 2017-2020/PID2020-117271RB-C21/ES/REGULACION DINAMICA MULTI-ESCALA EN INGENIERIA METABOLICA: CONTROL REALIMENTADO Y CICLO DBTL AUTOMATIZADO / info:eu-repo/grantAgreement/MINECO//SEV-2016-0672 Trends in biotechnology https://doi.org/10.1016/j.tibtech.2021.12.006 Sí open Elsevier