Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism
l-rhamnose (6-deoxy-mannose) occurs in nature mainly as a component of certain plant structural polysaccharides and bioactive metabolites but has also been found in some microorganisms and animals. The release of l-rhamnose from these substrates is catalysed by extracellular enzymes including α-l-rhamnosidases, the production of which is induced in its presence. The free sugar enters cells via specific uptake systems where it can be metabolized. Of two l-rhamnose catabolic pathways currently known in microorganisms a non-phosphorylated pathway has been identified in fungi and some bacteria but little is known of the regulatory mechanisms governing it in fungi. In this study two genes (lraA and lraB) are predicted to be involved in the catabolism of l-rhamnose, along with lraC, in the filamentous fungus Aspergillus nidulans. Transcription of all three is co-regulated with that of the genes encoding α-l-rhamnosidases, i.e. induction mediated by the l-rhamnose-responsive transcription factor RhaR and repression of induction in the presence of glucose via a CreA-independent mechanism. The participation of lraA/AN4186 (encoding l-rhamnose dehydrogenase) in l-rhamnose catabolism was revealed by the phenotypes of knock-out mutants and their complemented strains. lraA deletion negatively affects both growth on l-rhamnose and the synthesis of α-l-rhamnosidases, indicating not only the indispensability of this pathway for l-rhamnose utilization but also that a metabolite derived from this sugar is the true physiological inducer.
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Format: | artículo biblioteca |
Language: | English |
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BioMed Central
2020-10-02
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Subjects: | Aspergillus nidulans, L-rhamnose catabolism, Transcriptional regulation, RhaR, CCR, CreA-independent, LRA, lraA/AN4186, l-rhamnose dehydrogenase, RT-qPCR, α-l-rhamnosidases, |
Online Access: | http://hdl.handle.net/10261/221459 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/501100000780 |
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dig-iata-es-10261-2214592021-12-28T16:52:10Z Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism MacCabe, Andrew P. Ninou, E.I. Pardo, Ester Orejas, Margarita Ministerio de Economía y Competitividad (España) European Commission Aspergillus nidulans L-rhamnose catabolism Transcriptional regulation RhaR CCR CreA-independent LRA lraA/AN4186 l-rhamnose dehydrogenase RT-qPCR α-l-rhamnosidases l-rhamnose (6-deoxy-mannose) occurs in nature mainly as a component of certain plant structural polysaccharides and bioactive metabolites but has also been found in some microorganisms and animals. The release of l-rhamnose from these substrates is catalysed by extracellular enzymes including α-l-rhamnosidases, the production of which is induced in its presence. The free sugar enters cells via specific uptake systems where it can be metabolized. Of two l-rhamnose catabolic pathways currently known in microorganisms a non-phosphorylated pathway has been identified in fungi and some bacteria but little is known of the regulatory mechanisms governing it in fungi. In this study two genes (lraA and lraB) are predicted to be involved in the catabolism of l-rhamnose, along with lraC, in the filamentous fungus Aspergillus nidulans. Transcription of all three is co-regulated with that of the genes encoding α-l-rhamnosidases, i.e. induction mediated by the l-rhamnose-responsive transcription factor RhaR and repression of induction in the presence of glucose via a CreA-independent mechanism. The participation of lraA/AN4186 (encoding l-rhamnose dehydrogenase) in l-rhamnose catabolism was revealed by the phenotypes of knock-out mutants and their complemented strains. lraA deletion negatively affects both growth on l-rhamnose and the synthesis of α-l-rhamnosidases, indicating not only the indispensability of this pathway for l-rhamnose utilization but also that a metabolite derived from this sugar is the true physiological inducer. This work was supported by the Spanish Ministerio de Ciencia e Innovación/FEDER and Ministerio de Economía y Competitividad/FEDER (Grant Numbers AGL2011-29925 and AGL2015-6631-C2-2-R, respectively). Peer reviewed 2020-10-21T05:38:44Z 2020-10-21T05:38:44Z 2020-10-02 artículo http://purl.org/coar/resource_type/c_6501 Microbial Cell Factories 19(1): 188 (2020) http://hdl.handle.net/10261/221459 10.1186/s12934-020-01443-9 1475-2859 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/501100000780 33008411 en #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/AGL2015-6631-C2-2-R Publisher's version https://doi.org/10.1186/s12934-020-01443-9 Sí open BioMed Central |
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Aspergillus nidulans L-rhamnose catabolism Transcriptional regulation RhaR CCR CreA-independent LRA lraA/AN4186 l-rhamnose dehydrogenase RT-qPCR α-l-rhamnosidases Aspergillus nidulans L-rhamnose catabolism Transcriptional regulation RhaR CCR CreA-independent LRA lraA/AN4186 l-rhamnose dehydrogenase RT-qPCR α-l-rhamnosidases |
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Aspergillus nidulans L-rhamnose catabolism Transcriptional regulation RhaR CCR CreA-independent LRA lraA/AN4186 l-rhamnose dehydrogenase RT-qPCR α-l-rhamnosidases Aspergillus nidulans L-rhamnose catabolism Transcriptional regulation RhaR CCR CreA-independent LRA lraA/AN4186 l-rhamnose dehydrogenase RT-qPCR α-l-rhamnosidases MacCabe, Andrew P. Ninou, E.I. Pardo, Ester Orejas, Margarita Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism |
description |
l-rhamnose (6-deoxy-mannose) occurs in nature mainly as a component of certain plant structural polysaccharides and bioactive metabolites but has also been found in some microorganisms and animals. The release of l-rhamnose from these substrates is catalysed by extracellular enzymes including α-l-rhamnosidases, the production of which is induced in its presence. The free sugar enters cells via specific uptake systems where it can be metabolized. Of two l-rhamnose catabolic pathways currently known in microorganisms a non-phosphorylated pathway has been identified in fungi and some bacteria but little is known of the regulatory mechanisms governing it in fungi. In this study two genes (lraA and lraB) are predicted to be involved in the catabolism of l-rhamnose, along with lraC, in the filamentous fungus Aspergillus nidulans. Transcription of all three is co-regulated with that of the genes encoding α-l-rhamnosidases, i.e. induction mediated by the l-rhamnose-responsive transcription factor RhaR and repression of induction in the presence of glucose via a CreA-independent mechanism. The participation of lraA/AN4186 (encoding l-rhamnose dehydrogenase) in l-rhamnose catabolism was revealed by the phenotypes of knock-out mutants and their complemented strains. lraA deletion negatively affects both growth on l-rhamnose and the synthesis of α-l-rhamnosidases, indicating not only the indispensability of this pathway for l-rhamnose utilization but also that a metabolite derived from this sugar is the true physiological inducer. |
author2 |
Ministerio de Economía y Competitividad (España) |
author_facet |
Ministerio de Economía y Competitividad (España) MacCabe, Andrew P. Ninou, E.I. Pardo, Ester Orejas, Margarita |
format |
artículo |
topic_facet |
Aspergillus nidulans L-rhamnose catabolism Transcriptional regulation RhaR CCR CreA-independent LRA lraA/AN4186 l-rhamnose dehydrogenase RT-qPCR α-l-rhamnosidases |
author |
MacCabe, Andrew P. Ninou, E.I. Pardo, Ester Orejas, Margarita |
author_sort |
MacCabe, Andrew P. |
title |
Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism |
title_short |
Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism |
title_full |
Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism |
title_fullStr |
Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism |
title_full_unstemmed |
Catabolism of l-rhamnose in A. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a CreA-independent mechanism |
title_sort |
catabolism of l-rhamnose in a. nidulans proceeds via the non-phosphorylated pathway and is glucose repressed by a crea-independent mechanism |
publisher |
BioMed Central |
publishDate |
2020-10-02 |
url |
http://hdl.handle.net/10261/221459 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/501100000780 |
work_keys_str_mv |
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