Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection

Malus sieversii from Central Asia is a progenitor of the modern domesticated apple (Malus × domestica). Several accessions of M. sieversii are highly resistant to the postharvest pathogen Penicillium expansum. A previous study identified the qM–Pe3.1 QTL on LG3 for resistance to P. expansum in the mapping population GMAL4593, developed using the resistant accession, M. sieversii –PI613981, and the susceptible cultivar “Royal Gala” (RG) (M. domestica), as parents. The goal of the present study was to characterize the transcriptomic response of susceptible RG and resistant PI613981 apple fruit to wounding and inoculation with P. expansum using RNA–Seq. Transcriptomic analyses 0–48 h post inoculation suggest a higher basal level of resistance and a more rapid and intense defense response to wounding and wounding plus inoculation with P. expansum in M. sieversii –PI613981 than in RG. Functional analysis showed that ethylene–related genes and genes involved in “jasmonate” and “MYB–domain transcription factor family” were over–represented in the resistant genotype. It is suggested that the more rapid response in the resistant genotype (Malus sieversii–PI613981) plays a major role in the resistance response. At least twenty DEGs were mapped to the qM–Pe3.1 QTL (M × d v.1: 26,848,396–28,424,055) on LG3, and represent potential candidate genes responsible for the observed resistance QTL in M. sieversii–PI613981. RT–qPCR of several of these genes was used to validate the RNA–Seq data and to confirm their higher expression in MS0.

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Main Authors: Ballester Frutos, Ana Rosa, Norelli, John, Burchard, Erik, Abdelfattah, Ahmed, Levin, Elena, González-Candelas, Luis, Droby, Samir, Wisniewski, Michael
Other Authors: United States - Israel Binational Agricultural Research and Development Fund
Format: artículo biblioteca
Language:English
Published: Frontiers Media 2017-11-16
Subjects:Malus domestica, Penicillium expansum, Qualitative trait loci, Postharvest pathogens, Wound healing, Necrotrophic pathogens,
Online Access:http://hdl.handle.net/10261/158125
http://dx.doi.org/10.13039/501100003359
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/100006031
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spelling dig-iata-es-10261-1581252021-12-28T16:43:27Z Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection Ballester Frutos, Ana Rosa Norelli, John Burchard, Erik Abdelfattah, Ahmed Levin, Elena González-Candelas, Luis Droby, Samir Wisniewski, Michael United States - Israel Binational Agricultural Research and Development Fund Ministerio de Economía y Competitividad (España) Generalitat Valenciana Malus domestica Penicillium expansum Qualitative trait loci Postharvest pathogens Wound healing Necrotrophic pathogens Malus sieversii from Central Asia is a progenitor of the modern domesticated apple (Malus × domestica). Several accessions of M. sieversii are highly resistant to the postharvest pathogen Penicillium expansum. A previous study identified the qM–Pe3.1 QTL on LG3 for resistance to P. expansum in the mapping population GMAL4593, developed using the resistant accession, M. sieversii –PI613981, and the susceptible cultivar “Royal Gala” (RG) (M. domestica), as parents. The goal of the present study was to characterize the transcriptomic response of susceptible RG and resistant PI613981 apple fruit to wounding and inoculation with P. expansum using RNA–Seq. Transcriptomic analyses 0–48 h post inoculation suggest a higher basal level of resistance and a more rapid and intense defense response to wounding and wounding plus inoculation with P. expansum in M. sieversii –PI613981 than in RG. Functional analysis showed that ethylene–related genes and genes involved in “jasmonate” and “MYB–domain transcription factor family” were over–represented in the resistant genotype. It is suggested that the more rapid response in the resistant genotype (Malus sieversii–PI613981) plays a major role in the resistance response. At least twenty DEGs were mapped to the qM–Pe3.1 QTL (M × d v.1: 26,848,396–28,424,055) on LG3, and represent potential candidate genes responsible for the observed resistance QTL in M. sieversii–PI613981. RT–qPCR of several of these genes was used to validate the RNA–Seq data and to confirm their higher expression in MS0. The overall funding for this project was partially provided by BARD Grant US−4774–14C from the U.S.– Israel Binational Agricultural Research and Development (BARD) fund. Work in the LGC lab has been funded by the Spanish Ministry of Economy and Innovation (AGL2011–30519–C03–01 and AGL2014–55802–R) and the Generalitat Valenciana (PrometeoII/2014/027). Peer reviewed 2017-12-13T07:48:53Z 2017-12-13T07:48:53Z 2017-11-16 artículo http://purl.org/coar/resource_type/c_6501 Frontiers in Plant Science 8: 1981 (2017) 1664-462X http://hdl.handle.net/10261/158125 10.3389/fpls.2017.01981 http://dx.doi.org/10.13039/501100003359 http://dx.doi.org/10.13039/501100003329 http://dx.doi.org/10.13039/100006031 29201037 en #PLACEHOLDER_PARENT_METADATA_VALUE# info:eu-repo/grantAgreement/MINECO/Plan Estatal de Investigación Científica y Técnica y de Innovación 2013-2016/AGL2014-55802-R Publisher's version https://doi.org/10.3389/fpls.2017.01981 Sí open Frontiers Media
institution IATA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-iata-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IATA España
language English
topic Malus domestica
Penicillium expansum
Qualitative trait loci
Postharvest pathogens
Wound healing
Necrotrophic pathogens
Malus domestica
Penicillium expansum
Qualitative trait loci
Postharvest pathogens
Wound healing
Necrotrophic pathogens
spellingShingle Malus domestica
Penicillium expansum
Qualitative trait loci
Postharvest pathogens
Wound healing
Necrotrophic pathogens
Malus domestica
Penicillium expansum
Qualitative trait loci
Postharvest pathogens
Wound healing
Necrotrophic pathogens
Ballester Frutos, Ana Rosa
Norelli, John
Burchard, Erik
Abdelfattah, Ahmed
Levin, Elena
González-Candelas, Luis
Droby, Samir
Wisniewski, Michael
Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection
description Malus sieversii from Central Asia is a progenitor of the modern domesticated apple (Malus × domestica). Several accessions of M. sieversii are highly resistant to the postharvest pathogen Penicillium expansum. A previous study identified the qM–Pe3.1 QTL on LG3 for resistance to P. expansum in the mapping population GMAL4593, developed using the resistant accession, M. sieversii –PI613981, and the susceptible cultivar “Royal Gala” (RG) (M. domestica), as parents. The goal of the present study was to characterize the transcriptomic response of susceptible RG and resistant PI613981 apple fruit to wounding and inoculation with P. expansum using RNA–Seq. Transcriptomic analyses 0–48 h post inoculation suggest a higher basal level of resistance and a more rapid and intense defense response to wounding and wounding plus inoculation with P. expansum in M. sieversii –PI613981 than in RG. Functional analysis showed that ethylene–related genes and genes involved in “jasmonate” and “MYB–domain transcription factor family” were over–represented in the resistant genotype. It is suggested that the more rapid response in the resistant genotype (Malus sieversii–PI613981) plays a major role in the resistance response. At least twenty DEGs were mapped to the qM–Pe3.1 QTL (M × d v.1: 26,848,396–28,424,055) on LG3, and represent potential candidate genes responsible for the observed resistance QTL in M. sieversii–PI613981. RT–qPCR of several of these genes was used to validate the RNA–Seq data and to confirm their higher expression in MS0.
author2 United States - Israel Binational Agricultural Research and Development Fund
author_facet United States - Israel Binational Agricultural Research and Development Fund
Ballester Frutos, Ana Rosa
Norelli, John
Burchard, Erik
Abdelfattah, Ahmed
Levin, Elena
González-Candelas, Luis
Droby, Samir
Wisniewski, Michael
format artículo
topic_facet Malus domestica
Penicillium expansum
Qualitative trait loci
Postharvest pathogens
Wound healing
Necrotrophic pathogens
author Ballester Frutos, Ana Rosa
Norelli, John
Burchard, Erik
Abdelfattah, Ahmed
Levin, Elena
González-Candelas, Luis
Droby, Samir
Wisniewski, Michael
author_sort Ballester Frutos, Ana Rosa
title Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection
title_short Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection
title_full Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection
title_fullStr Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection
title_full_unstemmed Transcriptomic Response of Resistant (PI613981–Malus sieversii) and Susceptible (“Royal Gala”) Genotypes of Apple to Blue Mold (Penicillium expansum) Infection
title_sort transcriptomic response of resistant (pi613981–malus sieversii) and susceptible (“royal gala”) genotypes of apple to blue mold (penicillium expansum) infection
publisher Frontiers Media
publishDate 2017-11-16
url http://hdl.handle.net/10261/158125
http://dx.doi.org/10.13039/501100003359
http://dx.doi.org/10.13039/501100003329
http://dx.doi.org/10.13039/100006031
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