Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei

A Lactobacillus casei BL23 strain defective in an OmpR-family response regulator encoded by LCABL_18980 (PrcR, RR11), showed enhanced proteolytic activity caused by overexpression of the gene encoding the proteinase PrtP. Transcriptomic analysis revealed that, in addition to prtP expression, PrcR regulates genes encoding peptide and amino acid transporters, intracellular peptidases and amino acid biosynthetic pathways, among others. Binding of PrcR to twelve promoter regions of both upregulated and downregulated genes, including its own promoter, was demonstrated by electrophoretic mobility shift assays showing that PrcR can act as a transcriptional repressor or activator. Phosphorylation of PrcR increased its DNA binding activity and this effect was abolished after replacement of the phosphorylatable residue Asp-52 by alanine. Comparison of the transcript levels in cells grown in the presence or absence of tryptone in the growth medium revealed that PrcR activity responded to the presence of a complex amino acid source in the growth medium. We conclude that the PrcR plays a major role in the control of the peptide and amino acid metabolism in L. casei BL23. Orthologous prcR genes are present in most members of the Lactobacillaceae and Leuconostocaceae families. We hypothesize that they play a similar role in these bacterial groups.

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Bibliographic Details
Main Authors: Alcántara, Cristina, Bäuerl, Christine, Revilla Guarinos, Ainhoa, Pérez Martínez, Gaspar, Monedero, Vicente, Zúñiga, Manuel
Other Authors: Ministerio de Ciencia e Innovación (España)
Format: artículo biblioteca
Language:English
Published: John Wiley & Sons 2016-04
Subjects:Lactobacillus, Two‐component system, Protein and amino acid metabolism, Transcriptional regulation,
Online Access:http://hdl.handle.net/10261/130419
http://dx.doi.org/10.13039/501100004837
http://dx.doi.org/10.13039/501100003359
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spelling dig-iata-es-10261-1304192020-02-14T12:41:02Z Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei Alcántara, Cristina Bäuerl, Christine Revilla Guarinos, Ainhoa Pérez Martínez, Gaspar Monedero, Vicente Zúñiga, Manuel Ministerio de Ciencia e Innovación (España) Generalitat Valenciana Lactobacillus Two‐component system Protein and amino acid metabolism Transcriptional regulation A Lactobacillus casei BL23 strain defective in an OmpR-family response regulator encoded by LCABL_18980 (PrcR, RR11), showed enhanced proteolytic activity caused by overexpression of the gene encoding the proteinase PrtP. Transcriptomic analysis revealed that, in addition to prtP expression, PrcR regulates genes encoding peptide and amino acid transporters, intracellular peptidases and amino acid biosynthetic pathways, among others. Binding of PrcR to twelve promoter regions of both upregulated and downregulated genes, including its own promoter, was demonstrated by electrophoretic mobility shift assays showing that PrcR can act as a transcriptional repressor or activator. Phosphorylation of PrcR increased its DNA binding activity and this effect was abolished after replacement of the phosphorylatable residue Asp-52 by alanine. Comparison of the transcript levels in cells grown in the presence or absence of tryptone in the growth medium revealed that PrcR activity responded to the presence of a complex amino acid source in the growth medium. We conclude that the PrcR plays a major role in the control of the peptide and amino acid metabolism in L. casei BL23. Orthologous prcR genes are present in most members of the Lactobacillaceae and Leuconostocaceae families. We hypothesize that they play a similar role in these bacterial groups. This work was financed by funds from the former Spanish Ministry of Science and Innovation (AGL2007-60975 and AGL2010-15679) and Generalitat Valenciana (ACOMP2012/137). A. Revilla-Guarinos was the recipient of a research fellowship from the Instituto Danone. Peer reviewed 2016-03-23T13:36:04Z 2016-03-23T13:36:04Z 2016-04 artículo http://purl.org/coar/resource_type/c_6501 Molecular Microbiology (2016) 100: 25-41 0950-382X http://hdl.handle.net/10261/130419 10.1111/mmi.13299 1365-2958 http://dx.doi.org/10.13039/501100004837 http://dx.doi.org/10.13039/501100003359 en Postprint http://dx.doi.org/10.1111/mmi.13299 Sí open John Wiley & Sons
institution IATA ES
collection DSpace
country España
countrycode ES
component Bibliográfico
access En linea
databasecode dig-iata-es
tag biblioteca
region Europa del Sur
libraryname Biblioteca del IATA España
language English
topic Lactobacillus
Two‐component system
Protein and amino acid metabolism
Transcriptional regulation
Lactobacillus
Two‐component system
Protein and amino acid metabolism
Transcriptional regulation
spellingShingle Lactobacillus
Two‐component system
Protein and amino acid metabolism
Transcriptional regulation
Lactobacillus
Two‐component system
Protein and amino acid metabolism
Transcriptional regulation
Alcántara, Cristina
Bäuerl, Christine
Revilla Guarinos, Ainhoa
Pérez Martínez, Gaspar
Monedero, Vicente
Zúñiga, Manuel
Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei
description A Lactobacillus casei BL23 strain defective in an OmpR-family response regulator encoded by LCABL_18980 (PrcR, RR11), showed enhanced proteolytic activity caused by overexpression of the gene encoding the proteinase PrtP. Transcriptomic analysis revealed that, in addition to prtP expression, PrcR regulates genes encoding peptide and amino acid transporters, intracellular peptidases and amino acid biosynthetic pathways, among others. Binding of PrcR to twelve promoter regions of both upregulated and downregulated genes, including its own promoter, was demonstrated by electrophoretic mobility shift assays showing that PrcR can act as a transcriptional repressor or activator. Phosphorylation of PrcR increased its DNA binding activity and this effect was abolished after replacement of the phosphorylatable residue Asp-52 by alanine. Comparison of the transcript levels in cells grown in the presence or absence of tryptone in the growth medium revealed that PrcR activity responded to the presence of a complex amino acid source in the growth medium. We conclude that the PrcR plays a major role in the control of the peptide and amino acid metabolism in L. casei BL23. Orthologous prcR genes are present in most members of the Lactobacillaceae and Leuconostocaceae families. We hypothesize that they play a similar role in these bacterial groups.
author2 Ministerio de Ciencia e Innovación (España)
author_facet Ministerio de Ciencia e Innovación (España)
Alcántara, Cristina
Bäuerl, Christine
Revilla Guarinos, Ainhoa
Pérez Martínez, Gaspar
Monedero, Vicente
Zúñiga, Manuel
format artículo
topic_facet Lactobacillus
Two‐component system
Protein and amino acid metabolism
Transcriptional regulation
author Alcántara, Cristina
Bäuerl, Christine
Revilla Guarinos, Ainhoa
Pérez Martínez, Gaspar
Monedero, Vicente
Zúñiga, Manuel
author_sort Alcántara, Cristina
title Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei
title_short Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei
title_full Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei
title_fullStr Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei
title_full_unstemmed Peptide and amino acid metabolism is controlled by an OmpR-family response regulator in Lactobacillus casei
title_sort peptide and amino acid metabolism is controlled by an ompr-family response regulator in lactobacillus casei
publisher John Wiley & Sons
publishDate 2016-04
url http://hdl.handle.net/10261/130419
http://dx.doi.org/10.13039/501100004837
http://dx.doi.org/10.13039/501100003359
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