Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso

Molecular epidemiology studies further our understanding of migrations of phytopathogenic bacteria, the major determining factor in their emergence. Asiatic citrus canker, caused by Xanthomonas citri pv. citri, was recently reported in Mali and Burkina Faso, a region remote from other contaminated areas. To identify the origin and pathways of these emergences, we used two sets of markers, minisatellites and microsatellites, for investigating different evolutionary scales. Minisatellite typing suggested the introduction of two groups of strains in Mali (DAPC 1 and DAPC 2), consistent with microsatellite typing. DAPC 2 was restricted to Bamako district, whereas DAPC 1 strains were found much more invasive. The latter strains formed a major clonal complex based on microsatellite data with the primary and secondary founders detected in commercial citrus nurseries and orchards. This suggests that human activities played a major role in the spread of DAPC 1 strains via the movement of contaminated propagative material, further supported by the frequent lack of differentiation between populations from geographically distant nurseries and orchards. Approximate Bayesian Computation analyses supported the hypothesis that strains from Burkina Faso resulted from a bridgehead invasion from Mali. Multi-locus variable number of tandem repeat analysis and Approximate Bayesian Computation are useful for understanding invasion routes and pathways of monomorphic bacterial pathogens.

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Main Authors: Leduc, Alice, Traoré, Yaya Nadia, Boyer, Karine, Magne, Maxime, Grygiel, Pierre, Juhasz, C.C., Boyer, Claudine, Guérin, Fabien, Wonni, Issa, Ouédraogo, Léonard, Vernière, Christian, Ravigné, Virginie, Pruvost, Olivier
Format: article biblioteca
Language:eng
Subjects:H20 - Maladies des plantes, U30 - Méthodes de recherche, Xanthomonas campestris citri, Citrus, biologie moléculaire, transmission des maladies, provenance, marqueur génétique, microsatellite, minisatellite, multiplication des plantes, étiologie, génétique des populations, épidémiologie, http://aims.fao.org/aos/agrovoc/c_36120, http://aims.fao.org/aos/agrovoc/c_1637, http://aims.fao.org/aos/agrovoc/c_4891, http://aims.fao.org/aos/agrovoc/c_2329, http://aims.fao.org/aos/agrovoc/c_16022, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_36575, http://aims.fao.org/aos/agrovoc/c_5977, http://aims.fao.org/aos/agrovoc/c_15588, http://aims.fao.org/aos/agrovoc/c_34326, http://aims.fao.org/aos/agrovoc/c_2615, http://aims.fao.org/aos/agrovoc/c_4540, http://aims.fao.org/aos/agrovoc/c_8081,
Online Access:http://agritrop.cirad.fr/578738/
http://agritrop.cirad.fr/578738/1/Leduc_et_al-2015-Environmental_Microbiology.pdf
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spelling dig-cirad-fr-5787382024-01-28T23:08:32Z http://agritrop.cirad.fr/578738/ http://agritrop.cirad.fr/578738/ Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso. Leduc Alice, Traoré Yaya Nadia, Boyer Karine, Magne Maxime, Grygiel Pierre, Juhasz C.C., Boyer Claudine, Guérin Fabien, Wonni Issa, Ouédraogo Léonard, Vernière Christian, Ravigné Virginie, Pruvost Olivier. 2015. Environmental Microbiology, 17 (11) : 4429-4442.https://doi.org/10.1111/1462-2920.12876 <https://doi.org/10.1111/1462-2920.12876> Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso Leduc, Alice Traoré, Yaya Nadia Boyer, Karine Magne, Maxime Grygiel, Pierre Juhasz, C.C. Boyer, Claudine Guérin, Fabien Wonni, Issa Ouédraogo, Léonard Vernière, Christian Ravigné, Virginie Pruvost, Olivier eng 2015 Environmental Microbiology H20 - Maladies des plantes U30 - Méthodes de recherche Xanthomonas campestris citri Citrus biologie moléculaire transmission des maladies provenance marqueur génétique microsatellite minisatellite multiplication des plantes étiologie génétique des populations épidémiologie http://aims.fao.org/aos/agrovoc/c_36120 http://aims.fao.org/aos/agrovoc/c_1637 http://aims.fao.org/aos/agrovoc/c_4891 http://aims.fao.org/aos/agrovoc/c_2329 http://aims.fao.org/aos/agrovoc/c_16022 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_36575 http://aims.fao.org/aos/agrovoc/c_5977 http://aims.fao.org/aos/agrovoc/c_15588 http://aims.fao.org/aos/agrovoc/c_34326 http://aims.fao.org/aos/agrovoc/c_2615 Mali Burkina Faso http://aims.fao.org/aos/agrovoc/c_4540 http://aims.fao.org/aos/agrovoc/c_8081 Molecular epidemiology studies further our understanding of migrations of phytopathogenic bacteria, the major determining factor in their emergence. Asiatic citrus canker, caused by Xanthomonas citri pv. citri, was recently reported in Mali and Burkina Faso, a region remote from other contaminated areas. To identify the origin and pathways of these emergences, we used two sets of markers, minisatellites and microsatellites, for investigating different evolutionary scales. Minisatellite typing suggested the introduction of two groups of strains in Mali (DAPC 1 and DAPC 2), consistent with microsatellite typing. DAPC 2 was restricted to Bamako district, whereas DAPC 1 strains were found much more invasive. The latter strains formed a major clonal complex based on microsatellite data with the primary and secondary founders detected in commercial citrus nurseries and orchards. This suggests that human activities played a major role in the spread of DAPC 1 strains via the movement of contaminated propagative material, further supported by the frequent lack of differentiation between populations from geographically distant nurseries and orchards. Approximate Bayesian Computation analyses supported the hypothesis that strains from Burkina Faso resulted from a bridgehead invasion from Mali. Multi-locus variable number of tandem repeat analysis and Approximate Bayesian Computation are useful for understanding invasion routes and pathways of monomorphic bacterial pathogens. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/578738/1/Leduc_et_al-2015-Environmental_Microbiology.pdf text cc_by_nc_nd info:eu-repo/semantics/restrictedAccess https://creativecommons.org/licenses/by-nc-nd/4.0/ https://doi.org/10.1111/1462-2920.12876 10.1111/1462-2920.12876 info:eu-repo/semantics/altIdentifier/doi/10.1111/1462-2920.12876 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1111/1462-2920.12876
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H20 - Maladies des plantes
U30 - Méthodes de recherche
Xanthomonas campestris citri
Citrus
biologie moléculaire
transmission des maladies
provenance
marqueur génétique
microsatellite
minisatellite
multiplication des plantes
étiologie
génétique des populations
épidémiologie
http://aims.fao.org/aos/agrovoc/c_36120
http://aims.fao.org/aos/agrovoc/c_1637
http://aims.fao.org/aos/agrovoc/c_4891
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_16022
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_36575
http://aims.fao.org/aos/agrovoc/c_5977
http://aims.fao.org/aos/agrovoc/c_15588
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8081
H20 - Maladies des plantes
U30 - Méthodes de recherche
Xanthomonas campestris citri
Citrus
biologie moléculaire
transmission des maladies
provenance
marqueur génétique
microsatellite
minisatellite
multiplication des plantes
étiologie
génétique des populations
épidémiologie
http://aims.fao.org/aos/agrovoc/c_36120
http://aims.fao.org/aos/agrovoc/c_1637
http://aims.fao.org/aos/agrovoc/c_4891
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_16022
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_36575
http://aims.fao.org/aos/agrovoc/c_5977
http://aims.fao.org/aos/agrovoc/c_15588
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8081
spellingShingle H20 - Maladies des plantes
U30 - Méthodes de recherche
Xanthomonas campestris citri
Citrus
biologie moléculaire
transmission des maladies
provenance
marqueur génétique
microsatellite
minisatellite
multiplication des plantes
étiologie
génétique des populations
épidémiologie
http://aims.fao.org/aos/agrovoc/c_36120
http://aims.fao.org/aos/agrovoc/c_1637
http://aims.fao.org/aos/agrovoc/c_4891
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_16022
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_36575
http://aims.fao.org/aos/agrovoc/c_5977
http://aims.fao.org/aos/agrovoc/c_15588
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8081
H20 - Maladies des plantes
U30 - Méthodes de recherche
Xanthomonas campestris citri
Citrus
biologie moléculaire
transmission des maladies
provenance
marqueur génétique
microsatellite
minisatellite
multiplication des plantes
étiologie
génétique des populations
épidémiologie
http://aims.fao.org/aos/agrovoc/c_36120
http://aims.fao.org/aos/agrovoc/c_1637
http://aims.fao.org/aos/agrovoc/c_4891
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_16022
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_36575
http://aims.fao.org/aos/agrovoc/c_5977
http://aims.fao.org/aos/agrovoc/c_15588
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8081
Leduc, Alice
Traoré, Yaya Nadia
Boyer, Karine
Magne, Maxime
Grygiel, Pierre
Juhasz, C.C.
Boyer, Claudine
Guérin, Fabien
Wonni, Issa
Ouédraogo, Léonard
Vernière, Christian
Ravigné, Virginie
Pruvost, Olivier
Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso
description Molecular epidemiology studies further our understanding of migrations of phytopathogenic bacteria, the major determining factor in their emergence. Asiatic citrus canker, caused by Xanthomonas citri pv. citri, was recently reported in Mali and Burkina Faso, a region remote from other contaminated areas. To identify the origin and pathways of these emergences, we used two sets of markers, minisatellites and microsatellites, for investigating different evolutionary scales. Minisatellite typing suggested the introduction of two groups of strains in Mali (DAPC 1 and DAPC 2), consistent with microsatellite typing. DAPC 2 was restricted to Bamako district, whereas DAPC 1 strains were found much more invasive. The latter strains formed a major clonal complex based on microsatellite data with the primary and secondary founders detected in commercial citrus nurseries and orchards. This suggests that human activities played a major role in the spread of DAPC 1 strains via the movement of contaminated propagative material, further supported by the frequent lack of differentiation between populations from geographically distant nurseries and orchards. Approximate Bayesian Computation analyses supported the hypothesis that strains from Burkina Faso resulted from a bridgehead invasion from Mali. Multi-locus variable number of tandem repeat analysis and Approximate Bayesian Computation are useful for understanding invasion routes and pathways of monomorphic bacterial pathogens.
format article
topic_facet H20 - Maladies des plantes
U30 - Méthodes de recherche
Xanthomonas campestris citri
Citrus
biologie moléculaire
transmission des maladies
provenance
marqueur génétique
microsatellite
minisatellite
multiplication des plantes
étiologie
génétique des populations
épidémiologie
http://aims.fao.org/aos/agrovoc/c_36120
http://aims.fao.org/aos/agrovoc/c_1637
http://aims.fao.org/aos/agrovoc/c_4891
http://aims.fao.org/aos/agrovoc/c_2329
http://aims.fao.org/aos/agrovoc/c_16022
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_36575
http://aims.fao.org/aos/agrovoc/c_5977
http://aims.fao.org/aos/agrovoc/c_15588
http://aims.fao.org/aos/agrovoc/c_34326
http://aims.fao.org/aos/agrovoc/c_2615
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8081
author Leduc, Alice
Traoré, Yaya Nadia
Boyer, Karine
Magne, Maxime
Grygiel, Pierre
Juhasz, C.C.
Boyer, Claudine
Guérin, Fabien
Wonni, Issa
Ouédraogo, Léonard
Vernière, Christian
Ravigné, Virginie
Pruvost, Olivier
author_facet Leduc, Alice
Traoré, Yaya Nadia
Boyer, Karine
Magne, Maxime
Grygiel, Pierre
Juhasz, C.C.
Boyer, Claudine
Guérin, Fabien
Wonni, Issa
Ouédraogo, Léonard
Vernière, Christian
Ravigné, Virginie
Pruvost, Olivier
author_sort Leduc, Alice
title Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso
title_short Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso
title_full Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso
title_fullStr Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso
title_full_unstemmed Bridgehead invasion of a monomorphic plant pathogenic bacterium: Xanthomonas citri pv. citri, an emerging citrus pathogen in Mali and Burkina Faso
title_sort bridgehead invasion of a monomorphic plant pathogenic bacterium: xanthomonas citri pv. citri, an emerging citrus pathogen in mali and burkina faso
url http://agritrop.cirad.fr/578738/
http://agritrop.cirad.fr/578738/1/Leduc_et_al-2015-Environmental_Microbiology.pdf
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