Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)

Sixteen new polymorphic microsatellite loci were developed for the three species of the Ceratitis FAR complex (C. rosa, C. fasciventris and C. anonae) and their optimal amplification conditions characterised. These markers were tested on six field populations of the three fruit flies sampled in different African countries. After Bonferroni corrections, allele frequencies supported Hardy-Weinberg equilibrium for most of the loci, with only two loci not being at the equilibrium in all populations. No linkage disequilibrium was detected among all pairs of loci tested. These new markers will be a useful tool to study the intra- and interspecific genetic structure of these African agricultural pests and will help disentangling their well-known classification issues.

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Bibliographic Details
Main Authors: Delatte, Hélène, Virgilio, Massimiliano, Simiand, Christophe, Quilici, Serge, De Meyer, Marc
Format: article biblioteca
Language:eng
Subjects:H10 - Ravageurs des plantes, U30 - Méthodes de recherche, Ceratitis, microsatellite, marqueur génétique, ravageur des plantes, identification, isolement, culture fruitière, culture maraîchère, Mangifera indica, http://aims.fao.org/aos/agrovoc/c_1462, http://aims.fao.org/aos/agrovoc/c_36574, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_16196, http://aims.fao.org/aos/agrovoc/c_3791, http://aims.fao.org/aos/agrovoc/c_37744, http://aims.fao.org/aos/agrovoc/c_25476, http://aims.fao.org/aos/agrovoc/c_16509, http://aims.fao.org/aos/agrovoc/c_4575, http://aims.fao.org/aos/agrovoc/c_4964, http://aims.fao.org/aos/agrovoc/c_4086, http://aims.fao.org/aos/agrovoc/c_7252, http://aims.fao.org/aos/agrovoc/c_6717, http://aims.fao.org/aos/agrovoc/c_7608, http://aims.fao.org/aos/agrovoc/c_8501, http://aims.fao.org/aos/agrovoc/c_875, http://aims.fao.org/aos/agrovoc/c_4540, http://aims.fao.org/aos/agrovoc/c_8038, http://aims.fao.org/aos/agrovoc/c_8500, http://aims.fao.org/aos/agrovoc/c_1229,
Online Access:http://agritrop.cirad.fr/567457/
http://agritrop.cirad.fr/567457/1/dk567457.pdf
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spelling dig-cirad-fr-5674572024-01-28T21:09:02Z http://agritrop.cirad.fr/567457/ http://agritrop.cirad.fr/567457/ Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae). Delatte Hélène, Virgilio Massimiliano, Simiand Christophe, Quilici Serge, De Meyer Marc. 2013. Conservation Genetics Resources, 5 (1) : 31-34.https://doi.org/10.1007/s12686-012-9722-6 <https://doi.org/10.1007/s12686-012-9722-6> Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae) Delatte, Hélène Virgilio, Massimiliano Simiand, Christophe Quilici, Serge De Meyer, Marc eng 2013 Conservation Genetics Resources H10 - Ravageurs des plantes U30 - Méthodes de recherche Ceratitis microsatellite marqueur génétique ravageur des plantes identification isolement culture fruitière culture maraîchère Mangifera indica http://aims.fao.org/aos/agrovoc/c_1462 http://aims.fao.org/aos/agrovoc/c_36574 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_16196 http://aims.fao.org/aos/agrovoc/c_3791 http://aims.fao.org/aos/agrovoc/c_37744 http://aims.fao.org/aos/agrovoc/c_25476 http://aims.fao.org/aos/agrovoc/c_16509 http://aims.fao.org/aos/agrovoc/c_4575 Mozambique Kenya Afrique du Sud Rwanda République-Unie de Tanzanie Zambie Bénin Mali Ouganda République démocratique du Congo Cameroun http://aims.fao.org/aos/agrovoc/c_4964 http://aims.fao.org/aos/agrovoc/c_4086 http://aims.fao.org/aos/agrovoc/c_7252 http://aims.fao.org/aos/agrovoc/c_6717 http://aims.fao.org/aos/agrovoc/c_7608 http://aims.fao.org/aos/agrovoc/c_8501 http://aims.fao.org/aos/agrovoc/c_875 http://aims.fao.org/aos/agrovoc/c_4540 http://aims.fao.org/aos/agrovoc/c_8038 http://aims.fao.org/aos/agrovoc/c_8500 http://aims.fao.org/aos/agrovoc/c_1229 Sixteen new polymorphic microsatellite loci were developed for the three species of the Ceratitis FAR complex (C. rosa, C. fasciventris and C. anonae) and their optimal amplification conditions characterised. These markers were tested on six field populations of the three fruit flies sampled in different African countries. After Bonferroni corrections, allele frequencies supported Hardy-Weinberg equilibrium for most of the loci, with only two loci not being at the equilibrium in all populations. No linkage disequilibrium was detected among all pairs of loci tested. These new markers will be a useful tool to study the intra- and interspecific genetic structure of these African agricultural pests and will help disentangling their well-known classification issues. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/567457/1/dk567457.pdf text Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1007/s12686-012-9722-6 10.1007/s12686-012-9722-6 info:eu-repo/semantics/altIdentifier/doi/10.1007/s12686-012-9722-6 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1007/s12686-012-9722-6
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic H10 - Ravageurs des plantes
U30 - Méthodes de recherche
Ceratitis
microsatellite
marqueur génétique
ravageur des plantes
identification
isolement
culture fruitière
culture maraîchère
Mangifera indica
http://aims.fao.org/aos/agrovoc/c_1462
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_37744
http://aims.fao.org/aos/agrovoc/c_25476
http://aims.fao.org/aos/agrovoc/c_16509
http://aims.fao.org/aos/agrovoc/c_4575
http://aims.fao.org/aos/agrovoc/c_4964
http://aims.fao.org/aos/agrovoc/c_4086
http://aims.fao.org/aos/agrovoc/c_7252
http://aims.fao.org/aos/agrovoc/c_6717
http://aims.fao.org/aos/agrovoc/c_7608
http://aims.fao.org/aos/agrovoc/c_8501
http://aims.fao.org/aos/agrovoc/c_875
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8038
http://aims.fao.org/aos/agrovoc/c_8500
http://aims.fao.org/aos/agrovoc/c_1229
H10 - Ravageurs des plantes
U30 - Méthodes de recherche
Ceratitis
microsatellite
marqueur génétique
ravageur des plantes
identification
isolement
culture fruitière
culture maraîchère
Mangifera indica
http://aims.fao.org/aos/agrovoc/c_1462
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_37744
http://aims.fao.org/aos/agrovoc/c_25476
http://aims.fao.org/aos/agrovoc/c_16509
http://aims.fao.org/aos/agrovoc/c_4575
http://aims.fao.org/aos/agrovoc/c_4964
http://aims.fao.org/aos/agrovoc/c_4086
http://aims.fao.org/aos/agrovoc/c_7252
http://aims.fao.org/aos/agrovoc/c_6717
http://aims.fao.org/aos/agrovoc/c_7608
http://aims.fao.org/aos/agrovoc/c_8501
http://aims.fao.org/aos/agrovoc/c_875
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8038
http://aims.fao.org/aos/agrovoc/c_8500
http://aims.fao.org/aos/agrovoc/c_1229
spellingShingle H10 - Ravageurs des plantes
U30 - Méthodes de recherche
Ceratitis
microsatellite
marqueur génétique
ravageur des plantes
identification
isolement
culture fruitière
culture maraîchère
Mangifera indica
http://aims.fao.org/aos/agrovoc/c_1462
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_37744
http://aims.fao.org/aos/agrovoc/c_25476
http://aims.fao.org/aos/agrovoc/c_16509
http://aims.fao.org/aos/agrovoc/c_4575
http://aims.fao.org/aos/agrovoc/c_4964
http://aims.fao.org/aos/agrovoc/c_4086
http://aims.fao.org/aos/agrovoc/c_7252
http://aims.fao.org/aos/agrovoc/c_6717
http://aims.fao.org/aos/agrovoc/c_7608
http://aims.fao.org/aos/agrovoc/c_8501
http://aims.fao.org/aos/agrovoc/c_875
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8038
http://aims.fao.org/aos/agrovoc/c_8500
http://aims.fao.org/aos/agrovoc/c_1229
H10 - Ravageurs des plantes
U30 - Méthodes de recherche
Ceratitis
microsatellite
marqueur génétique
ravageur des plantes
identification
isolement
culture fruitière
culture maraîchère
Mangifera indica
http://aims.fao.org/aos/agrovoc/c_1462
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_37744
http://aims.fao.org/aos/agrovoc/c_25476
http://aims.fao.org/aos/agrovoc/c_16509
http://aims.fao.org/aos/agrovoc/c_4575
http://aims.fao.org/aos/agrovoc/c_4964
http://aims.fao.org/aos/agrovoc/c_4086
http://aims.fao.org/aos/agrovoc/c_7252
http://aims.fao.org/aos/agrovoc/c_6717
http://aims.fao.org/aos/agrovoc/c_7608
http://aims.fao.org/aos/agrovoc/c_8501
http://aims.fao.org/aos/agrovoc/c_875
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8038
http://aims.fao.org/aos/agrovoc/c_8500
http://aims.fao.org/aos/agrovoc/c_1229
Delatte, Hélène
Virgilio, Massimiliano
Simiand, Christophe
Quilici, Serge
De Meyer, Marc
Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)
description Sixteen new polymorphic microsatellite loci were developed for the three species of the Ceratitis FAR complex (C. rosa, C. fasciventris and C. anonae) and their optimal amplification conditions characterised. These markers were tested on six field populations of the three fruit flies sampled in different African countries. After Bonferroni corrections, allele frequencies supported Hardy-Weinberg equilibrium for most of the loci, with only two loci not being at the equilibrium in all populations. No linkage disequilibrium was detected among all pairs of loci tested. These new markers will be a useful tool to study the intra- and interspecific genetic structure of these African agricultural pests and will help disentangling their well-known classification issues.
format article
topic_facet H10 - Ravageurs des plantes
U30 - Méthodes de recherche
Ceratitis
microsatellite
marqueur génétique
ravageur des plantes
identification
isolement
culture fruitière
culture maraîchère
Mangifera indica
http://aims.fao.org/aos/agrovoc/c_1462
http://aims.fao.org/aos/agrovoc/c_36574
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_16196
http://aims.fao.org/aos/agrovoc/c_3791
http://aims.fao.org/aos/agrovoc/c_37744
http://aims.fao.org/aos/agrovoc/c_25476
http://aims.fao.org/aos/agrovoc/c_16509
http://aims.fao.org/aos/agrovoc/c_4575
http://aims.fao.org/aos/agrovoc/c_4964
http://aims.fao.org/aos/agrovoc/c_4086
http://aims.fao.org/aos/agrovoc/c_7252
http://aims.fao.org/aos/agrovoc/c_6717
http://aims.fao.org/aos/agrovoc/c_7608
http://aims.fao.org/aos/agrovoc/c_8501
http://aims.fao.org/aos/agrovoc/c_875
http://aims.fao.org/aos/agrovoc/c_4540
http://aims.fao.org/aos/agrovoc/c_8038
http://aims.fao.org/aos/agrovoc/c_8500
http://aims.fao.org/aos/agrovoc/c_1229
author Delatte, Hélène
Virgilio, Massimiliano
Simiand, Christophe
Quilici, Serge
De Meyer, Marc
author_facet Delatte, Hélène
Virgilio, Massimiliano
Simiand, Christophe
Quilici, Serge
De Meyer, Marc
author_sort Delatte, Hélène
title Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)
title_short Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)
title_full Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)
title_fullStr Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)
title_full_unstemmed Isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three African agricultural pests (Ceratitis rosa, C. anonae and C. fasciventris, Diptera: Tephritidae)
title_sort isolation and characterisation of sixteen microsatellite markers cross-amplifying in a complex of three african agricultural pests (ceratitis rosa, c. anonae and c. fasciventris, diptera: tephritidae)
url http://agritrop.cirad.fr/567457/
http://agritrop.cirad.fr/567457/1/dk567457.pdf
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