Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy

Tree crown architecture affects light interception, biomass production and mechanical stability. Crown architecture is largely determined by the topological development of the plant due to meristem activity. Modeling approaches can provide new insights into the dynamics of plant topology, but they are often hampered by experimental difficulties in data collection on complex trees with numerous internodes, especially in tropical tree species that present the additional difficulty of continuous growth with no marked cessation. Tree topological structure shows high variability resulting from genotypic and environmental factors in real stands. In this paper, a stochastic model was developed to describe the topological development of trees. In the model, growth and branching processes are driven by the respective probabilities of activity, rest or death of apical and lateral buds. Because of its mathematical formulation, the model inversion can be done analytically - which is rare - and parameter values can be estimated from experimental data. A new strategy was defined to sample measurements and applied to five eucalyptus trees. Incomplete systems were also defined for the case, common with trees, of incomplete datasets. After parameter estimation, simulation of random eucalyptus tree was presented. The model could describe tree topological development of eucalyptus reasonably well. This work offers a simple and practical method to describe the topological development of trees with continuous growth. It can realistically and flexibly describe the canopy topological development, and has the potential to be integrated with the process of biomass production and allocation for functional-structural plant modeling in the future.

Saved in:
Bibliographic Details
Main Authors: Diao, Jun, De Reffye, Philippe, Lei, Xiangdong, Guo, Hong, Letort, Véronique
Format: article biblioteca
Language:eng
Subjects:U10 - Informatique, mathématiques et statistiques, F62 - Physiologie végétale - Croissance et développement, F50 - Anatomie et morphologie des plantes, K10 - Production forestière, Eucalyptus, modèle mathématique, mortalité, développement biologique, http://aims.fao.org/aos/agrovoc/c_2683, http://aims.fao.org/aos/agrovoc/c_24199, http://aims.fao.org/aos/agrovoc/c_4945, http://aims.fao.org/aos/agrovoc/c_921, http://aims.fao.org/aos/agrovoc/c_1556,
Online Access:http://agritrop.cirad.fr/562749/
http://agritrop.cirad.fr/562749/1/document_562749.pdf
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cirad-fr-562749
record_format koha
spelling dig-cirad-fr-5627492024-01-28T19:57:36Z http://agritrop.cirad.fr/562749/ http://agritrop.cirad.fr/562749/ Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy. Diao Jun, De Reffye Philippe, Lei Xiangdong, Guo Hong, Letort Véronique. 2012. Computers and Electronics in Agriculture, 80 (1) : 105-114.https://doi.org/10.1016/j.compag.2011.10.019 <https://doi.org/10.1016/j.compag.2011.10.019> Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy Diao, Jun De Reffye, Philippe Lei, Xiangdong Guo, Hong Letort, Véronique eng 2012 Computers and Electronics in Agriculture U10 - Informatique, mathématiques et statistiques F62 - Physiologie végétale - Croissance et développement F50 - Anatomie et morphologie des plantes K10 - Production forestière Eucalyptus modèle mathématique mortalité développement biologique http://aims.fao.org/aos/agrovoc/c_2683 http://aims.fao.org/aos/agrovoc/c_24199 http://aims.fao.org/aos/agrovoc/c_4945 http://aims.fao.org/aos/agrovoc/c_921 Chine http://aims.fao.org/aos/agrovoc/c_1556 Tree crown architecture affects light interception, biomass production and mechanical stability. Crown architecture is largely determined by the topological development of the plant due to meristem activity. Modeling approaches can provide new insights into the dynamics of plant topology, but they are often hampered by experimental difficulties in data collection on complex trees with numerous internodes, especially in tropical tree species that present the additional difficulty of continuous growth with no marked cessation. Tree topological structure shows high variability resulting from genotypic and environmental factors in real stands. In this paper, a stochastic model was developed to describe the topological development of trees. In the model, growth and branching processes are driven by the respective probabilities of activity, rest or death of apical and lateral buds. Because of its mathematical formulation, the model inversion can be done analytically - which is rare - and parameter values can be estimated from experimental data. A new strategy was defined to sample measurements and applied to five eucalyptus trees. Incomplete systems were also defined for the case, common with trees, of incomplete datasets. After parameter estimation, simulation of random eucalyptus tree was presented. The model could describe tree topological development of eucalyptus reasonably well. This work offers a simple and practical method to describe the topological development of trees with continuous growth. It can realistically and flexibly describe the canopy topological development, and has the potential to be integrated with the process of biomass production and allocation for functional-structural plant modeling in the future. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/562749/1/document_562749.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1016/j.compag.2011.10.019 10.1016/j.compag.2011.10.019 info:eu-repo/semantics/altIdentifier/doi/10.1016/j.compag.2011.10.019 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1016/j.compag.2011.10.019
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic U10 - Informatique, mathématiques et statistiques
F62 - Physiologie végétale - Croissance et développement
F50 - Anatomie et morphologie des plantes
K10 - Production forestière
Eucalyptus
modèle mathématique
mortalité
développement biologique
http://aims.fao.org/aos/agrovoc/c_2683
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_4945
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_1556
U10 - Informatique, mathématiques et statistiques
F62 - Physiologie végétale - Croissance et développement
F50 - Anatomie et morphologie des plantes
K10 - Production forestière
Eucalyptus
modèle mathématique
mortalité
développement biologique
http://aims.fao.org/aos/agrovoc/c_2683
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_4945
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_1556
spellingShingle U10 - Informatique, mathématiques et statistiques
F62 - Physiologie végétale - Croissance et développement
F50 - Anatomie et morphologie des plantes
K10 - Production forestière
Eucalyptus
modèle mathématique
mortalité
développement biologique
http://aims.fao.org/aos/agrovoc/c_2683
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_4945
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_1556
U10 - Informatique, mathématiques et statistiques
F62 - Physiologie végétale - Croissance et développement
F50 - Anatomie et morphologie des plantes
K10 - Production forestière
Eucalyptus
modèle mathématique
mortalité
développement biologique
http://aims.fao.org/aos/agrovoc/c_2683
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_4945
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_1556
Diao, Jun
De Reffye, Philippe
Lei, Xiangdong
Guo, Hong
Letort, Véronique
Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
description Tree crown architecture affects light interception, biomass production and mechanical stability. Crown architecture is largely determined by the topological development of the plant due to meristem activity. Modeling approaches can provide new insights into the dynamics of plant topology, but they are often hampered by experimental difficulties in data collection on complex trees with numerous internodes, especially in tropical tree species that present the additional difficulty of continuous growth with no marked cessation. Tree topological structure shows high variability resulting from genotypic and environmental factors in real stands. In this paper, a stochastic model was developed to describe the topological development of trees. In the model, growth and branching processes are driven by the respective probabilities of activity, rest or death of apical and lateral buds. Because of its mathematical formulation, the model inversion can be done analytically - which is rare - and parameter values can be estimated from experimental data. A new strategy was defined to sample measurements and applied to five eucalyptus trees. Incomplete systems were also defined for the case, common with trees, of incomplete datasets. After parameter estimation, simulation of random eucalyptus tree was presented. The model could describe tree topological development of eucalyptus reasonably well. This work offers a simple and practical method to describe the topological development of trees with continuous growth. It can realistically and flexibly describe the canopy topological development, and has the potential to be integrated with the process of biomass production and allocation for functional-structural plant modeling in the future.
format article
topic_facet U10 - Informatique, mathématiques et statistiques
F62 - Physiologie végétale - Croissance et développement
F50 - Anatomie et morphologie des plantes
K10 - Production forestière
Eucalyptus
modèle mathématique
mortalité
développement biologique
http://aims.fao.org/aos/agrovoc/c_2683
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_4945
http://aims.fao.org/aos/agrovoc/c_921
http://aims.fao.org/aos/agrovoc/c_1556
author Diao, Jun
De Reffye, Philippe
Lei, Xiangdong
Guo, Hong
Letort, Véronique
author_facet Diao, Jun
De Reffye, Philippe
Lei, Xiangdong
Guo, Hong
Letort, Véronique
author_sort Diao, Jun
title Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
title_short Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
title_full Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
title_fullStr Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
title_full_unstemmed Simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
title_sort simulation of the topological development of young eucalyptus using a stochastic model and sampling measurement strategy
url http://agritrop.cirad.fr/562749/
http://agritrop.cirad.fr/562749/1/document_562749.pdf
work_keys_str_mv AT diaojun simulationofthetopologicaldevelopmentofyoungeucalyptususingastochasticmodelandsamplingmeasurementstrategy
AT dereffyephilippe simulationofthetopologicaldevelopmentofyoungeucalyptususingastochasticmodelandsamplingmeasurementstrategy
AT leixiangdong simulationofthetopologicaldevelopmentofyoungeucalyptususingastochasticmodelandsamplingmeasurementstrategy
AT guohong simulationofthetopologicaldevelopmentofyoungeucalyptususingastochasticmodelandsamplingmeasurementstrategy
AT letortveronique simulationofthetopologicaldevelopmentofyoungeucalyptususingastochasticmodelandsamplingmeasurementstrategy
_version_ 1792498036458389504