Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level

Carbon isotope discrimination (?13C) is considered as an index of leaf-level water use efficiency, an important objective for plant breeders seeking to conserve water resources. We report in rice a genetic analysis for ?13C, leaf structural parameters, gas exchange, stomatal conductance, and leaf abscisic acid (ABA) concentrations. Doubled haploid and recombinant inbred populations, both derived from the cross IR64 × Azucena, were used for quantitative trait locus (QTL) analysis following greenhouse experiments. ?13C QTLs on the long arms of chromosomes 4 and 5 were colocalized with QTLs associated with leaf blade width, length, and flatness, while a QTL cluster for ?13C, photosynthesis parameters, and ABA was observed in the near-centromeric region of chromosome 4. These results are consistent with phenotypic correlations and suggest that genetic variation in carbon assimilation and stomatal conductance contribute to the genetic variation for ?13C in this population.

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Bibliographic Details
Main Authors: This, Dominique, Comstock, Jonathan, Courtois, Brigitte, Xu, Yunbi, Ahmadi, Nourollah, Vonhof, Wendy M, Fleet, Christine, Setter, Tim, Mc Couch, Susan R.
Format: article biblioteca
Language:eng
Subjects:F30 - Génétique et amélioration des plantes, F70 - Taxonomie végétale et phytogéographie, P01 - Conservation de la nature et ressources foncières, Oryza sativa, Oryza glaberrima, variation génétique, érosion génétique, photosynthèse, eau, physiologie végétale, conservation des ressources génétiques, gestion des ressources, plante de culture, plante sauvage, histoire, http://aims.fao.org/aos/agrovoc/c_5438, http://aims.fao.org/aos/agrovoc/c_5436, http://aims.fao.org/aos/agrovoc/c_15975, http://aims.fao.org/aos/agrovoc/c_331598, http://aims.fao.org/aos/agrovoc/c_5812, http://aims.fao.org/aos/agrovoc/c_8309, http://aims.fao.org/aos/agrovoc/c_25189, http://aims.fao.org/aos/agrovoc/c_37280, http://aims.fao.org/aos/agrovoc/c_6524, http://aims.fao.org/aos/agrovoc/c_1972, http://aims.fao.org/aos/agrovoc/c_24126, http://aims.fao.org/aos/agrovoc/c_3635, http://aims.fao.org/aos/agrovoc/c_666, http://aims.fao.org/aos/agrovoc/c_165, http://aims.fao.org/aos/agrovoc/c_1556, http://aims.fao.org/aos/agrovoc/c_810, http://aims.fao.org/aos/agrovoc/c_3825, http://aims.fao.org/aos/agrovoc/c_5124, http://aims.fao.org/aos/agrovoc/c_12076, http://aims.fao.org/aos/agrovoc/c_7260, http://aims.fao.org/aos/agrovoc/c_4073, http://aims.fao.org/aos/agrovoc/c_8227, http://aims.fao.org/aos/agrovoc/c_7701, http://aims.fao.org/aos/agrovoc/c_8355, http://aims.fao.org/aos/agrovoc/c_4510, http://aims.fao.org/aos/agrovoc/c_3423,
Online Access:http://agritrop.cirad.fr/557136/
http://agritrop.cirad.fr/557136/1/document_557136.pdf
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spelling dig-cirad-fr-5571362024-01-28T18:41:34Z http://agritrop.cirad.fr/557136/ http://agritrop.cirad.fr/557136/ Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level. This Dominique, Comstock Jonathan, Courtois Brigitte, Xu Yunbi, Ahmadi Nourollah, Vonhof Wendy M, Fleet Christine, Setter Tim, Mc Couch Susan R.. 2010. Rice, 3 : 72-86.https://doi.org/10.1007/s12284-010-9036-9 <https://doi.org/10.1007/s12284-010-9036-9> Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level This, Dominique Comstock, Jonathan Courtois, Brigitte Xu, Yunbi Ahmadi, Nourollah Vonhof, Wendy M Fleet, Christine Setter, Tim Mc Couch, Susan R. eng 2010 Rice F30 - Génétique et amélioration des plantes F70 - Taxonomie végétale et phytogéographie P01 - Conservation de la nature et ressources foncières Oryza sativa Oryza glaberrima variation génétique érosion génétique photosynthèse eau physiologie végétale conservation des ressources génétiques gestion des ressources plante de culture plante sauvage histoire http://aims.fao.org/aos/agrovoc/c_5438 http://aims.fao.org/aos/agrovoc/c_5436 http://aims.fao.org/aos/agrovoc/c_15975 http://aims.fao.org/aos/agrovoc/c_331598 http://aims.fao.org/aos/agrovoc/c_5812 http://aims.fao.org/aos/agrovoc/c_8309 http://aims.fao.org/aos/agrovoc/c_25189 http://aims.fao.org/aos/agrovoc/c_37280 http://aims.fao.org/aos/agrovoc/c_6524 http://aims.fao.org/aos/agrovoc/c_1972 http://aims.fao.org/aos/agrovoc/c_24126 http://aims.fao.org/aos/agrovoc/c_3635 Asie Afrique Chine Bangladesh Inde Népal République démocratique populaire lao Asie du Sud-Est Cambodge Viet Nam Thaïlande Afrique occidentale Madagascar Guinée http://aims.fao.org/aos/agrovoc/c_666 http://aims.fao.org/aos/agrovoc/c_165 http://aims.fao.org/aos/agrovoc/c_1556 http://aims.fao.org/aos/agrovoc/c_810 http://aims.fao.org/aos/agrovoc/c_3825 http://aims.fao.org/aos/agrovoc/c_5124 http://aims.fao.org/aos/agrovoc/c_12076 http://aims.fao.org/aos/agrovoc/c_7260 http://aims.fao.org/aos/agrovoc/c_4073 http://aims.fao.org/aos/agrovoc/c_8227 http://aims.fao.org/aos/agrovoc/c_7701 http://aims.fao.org/aos/agrovoc/c_8355 http://aims.fao.org/aos/agrovoc/c_4510 http://aims.fao.org/aos/agrovoc/c_3423 Carbon isotope discrimination (?13C) is considered as an index of leaf-level water use efficiency, an important objective for plant breeders seeking to conserve water resources. We report in rice a genetic analysis for ?13C, leaf structural parameters, gas exchange, stomatal conductance, and leaf abscisic acid (ABA) concentrations. Doubled haploid and recombinant inbred populations, both derived from the cross IR64 × Azucena, were used for quantitative trait locus (QTL) analysis following greenhouse experiments. ?13C QTLs on the long arms of chromosomes 4 and 5 were colocalized with QTLs associated with leaf blade width, length, and flatness, while a QTL cluster for ?13C, photosynthesis parameters, and ABA was observed in the near-centromeric region of chromosome 4. These results are consistent with phenotypic correlations and suggest that genetic variation in carbon assimilation and stomatal conductance contribute to the genetic variation for ?13C in this population. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/557136/1/document_557136.pdf application/pdf Cirad license info:eu-repo/semantics/openAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1007/s12284-010-9036-9 10.1007/s12284-010-9036-9 info:eu-repo/semantics/altIdentifier/doi/10.1007/s12284-010-9036-9 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1007/s12284-010-9036-9
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
P01 - Conservation de la nature et ressources foncières
Oryza sativa
Oryza glaberrima
variation génétique
érosion génétique
photosynthèse
eau
physiologie végétale
conservation des ressources génétiques
gestion des ressources
plante de culture
plante sauvage
histoire
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5436
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_331598
http://aims.fao.org/aos/agrovoc/c_5812
http://aims.fao.org/aos/agrovoc/c_8309
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_37280
http://aims.fao.org/aos/agrovoc/c_6524
http://aims.fao.org/aos/agrovoc/c_1972
http://aims.fao.org/aos/agrovoc/c_24126
http://aims.fao.org/aos/agrovoc/c_3635
http://aims.fao.org/aos/agrovoc/c_666
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_1556
http://aims.fao.org/aos/agrovoc/c_810
http://aims.fao.org/aos/agrovoc/c_3825
http://aims.fao.org/aos/agrovoc/c_5124
http://aims.fao.org/aos/agrovoc/c_12076
http://aims.fao.org/aos/agrovoc/c_7260
http://aims.fao.org/aos/agrovoc/c_4073
http://aims.fao.org/aos/agrovoc/c_8227
http://aims.fao.org/aos/agrovoc/c_7701
http://aims.fao.org/aos/agrovoc/c_8355
http://aims.fao.org/aos/agrovoc/c_4510
http://aims.fao.org/aos/agrovoc/c_3423
F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
P01 - Conservation de la nature et ressources foncières
Oryza sativa
Oryza glaberrima
variation génétique
érosion génétique
photosynthèse
eau
physiologie végétale
conservation des ressources génétiques
gestion des ressources
plante de culture
plante sauvage
histoire
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5436
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_331598
http://aims.fao.org/aos/agrovoc/c_5812
http://aims.fao.org/aos/agrovoc/c_8309
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_37280
http://aims.fao.org/aos/agrovoc/c_6524
http://aims.fao.org/aos/agrovoc/c_1972
http://aims.fao.org/aos/agrovoc/c_24126
http://aims.fao.org/aos/agrovoc/c_3635
http://aims.fao.org/aos/agrovoc/c_666
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_1556
http://aims.fao.org/aos/agrovoc/c_810
http://aims.fao.org/aos/agrovoc/c_3825
http://aims.fao.org/aos/agrovoc/c_5124
http://aims.fao.org/aos/agrovoc/c_12076
http://aims.fao.org/aos/agrovoc/c_7260
http://aims.fao.org/aos/agrovoc/c_4073
http://aims.fao.org/aos/agrovoc/c_8227
http://aims.fao.org/aos/agrovoc/c_7701
http://aims.fao.org/aos/agrovoc/c_8355
http://aims.fao.org/aos/agrovoc/c_4510
http://aims.fao.org/aos/agrovoc/c_3423
spellingShingle F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
P01 - Conservation de la nature et ressources foncières
Oryza sativa
Oryza glaberrima
variation génétique
érosion génétique
photosynthèse
eau
physiologie végétale
conservation des ressources génétiques
gestion des ressources
plante de culture
plante sauvage
histoire
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5436
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_331598
http://aims.fao.org/aos/agrovoc/c_5812
http://aims.fao.org/aos/agrovoc/c_8309
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_37280
http://aims.fao.org/aos/agrovoc/c_6524
http://aims.fao.org/aos/agrovoc/c_1972
http://aims.fao.org/aos/agrovoc/c_24126
http://aims.fao.org/aos/agrovoc/c_3635
http://aims.fao.org/aos/agrovoc/c_666
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_1556
http://aims.fao.org/aos/agrovoc/c_810
http://aims.fao.org/aos/agrovoc/c_3825
http://aims.fao.org/aos/agrovoc/c_5124
http://aims.fao.org/aos/agrovoc/c_12076
http://aims.fao.org/aos/agrovoc/c_7260
http://aims.fao.org/aos/agrovoc/c_4073
http://aims.fao.org/aos/agrovoc/c_8227
http://aims.fao.org/aos/agrovoc/c_7701
http://aims.fao.org/aos/agrovoc/c_8355
http://aims.fao.org/aos/agrovoc/c_4510
http://aims.fao.org/aos/agrovoc/c_3423
F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
P01 - Conservation de la nature et ressources foncières
Oryza sativa
Oryza glaberrima
variation génétique
érosion génétique
photosynthèse
eau
physiologie végétale
conservation des ressources génétiques
gestion des ressources
plante de culture
plante sauvage
histoire
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5436
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_331598
http://aims.fao.org/aos/agrovoc/c_5812
http://aims.fao.org/aos/agrovoc/c_8309
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_37280
http://aims.fao.org/aos/agrovoc/c_6524
http://aims.fao.org/aos/agrovoc/c_1972
http://aims.fao.org/aos/agrovoc/c_24126
http://aims.fao.org/aos/agrovoc/c_3635
http://aims.fao.org/aos/agrovoc/c_666
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_1556
http://aims.fao.org/aos/agrovoc/c_810
http://aims.fao.org/aos/agrovoc/c_3825
http://aims.fao.org/aos/agrovoc/c_5124
http://aims.fao.org/aos/agrovoc/c_12076
http://aims.fao.org/aos/agrovoc/c_7260
http://aims.fao.org/aos/agrovoc/c_4073
http://aims.fao.org/aos/agrovoc/c_8227
http://aims.fao.org/aos/agrovoc/c_7701
http://aims.fao.org/aos/agrovoc/c_8355
http://aims.fao.org/aos/agrovoc/c_4510
http://aims.fao.org/aos/agrovoc/c_3423
This, Dominique
Comstock, Jonathan
Courtois, Brigitte
Xu, Yunbi
Ahmadi, Nourollah
Vonhof, Wendy M
Fleet, Christine
Setter, Tim
Mc Couch, Susan R.
Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level
description Carbon isotope discrimination (?13C) is considered as an index of leaf-level water use efficiency, an important objective for plant breeders seeking to conserve water resources. We report in rice a genetic analysis for ?13C, leaf structural parameters, gas exchange, stomatal conductance, and leaf abscisic acid (ABA) concentrations. Doubled haploid and recombinant inbred populations, both derived from the cross IR64 × Azucena, were used for quantitative trait locus (QTL) analysis following greenhouse experiments. ?13C QTLs on the long arms of chromosomes 4 and 5 were colocalized with QTLs associated with leaf blade width, length, and flatness, while a QTL cluster for ?13C, photosynthesis parameters, and ABA was observed in the near-centromeric region of chromosome 4. These results are consistent with phenotypic correlations and suggest that genetic variation in carbon assimilation and stomatal conductance contribute to the genetic variation for ?13C in this population.
format article
topic_facet F30 - Génétique et amélioration des plantes
F70 - Taxonomie végétale et phytogéographie
P01 - Conservation de la nature et ressources foncières
Oryza sativa
Oryza glaberrima
variation génétique
érosion génétique
photosynthèse
eau
physiologie végétale
conservation des ressources génétiques
gestion des ressources
plante de culture
plante sauvage
histoire
http://aims.fao.org/aos/agrovoc/c_5438
http://aims.fao.org/aos/agrovoc/c_5436
http://aims.fao.org/aos/agrovoc/c_15975
http://aims.fao.org/aos/agrovoc/c_331598
http://aims.fao.org/aos/agrovoc/c_5812
http://aims.fao.org/aos/agrovoc/c_8309
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_37280
http://aims.fao.org/aos/agrovoc/c_6524
http://aims.fao.org/aos/agrovoc/c_1972
http://aims.fao.org/aos/agrovoc/c_24126
http://aims.fao.org/aos/agrovoc/c_3635
http://aims.fao.org/aos/agrovoc/c_666
http://aims.fao.org/aos/agrovoc/c_165
http://aims.fao.org/aos/agrovoc/c_1556
http://aims.fao.org/aos/agrovoc/c_810
http://aims.fao.org/aos/agrovoc/c_3825
http://aims.fao.org/aos/agrovoc/c_5124
http://aims.fao.org/aos/agrovoc/c_12076
http://aims.fao.org/aos/agrovoc/c_7260
http://aims.fao.org/aos/agrovoc/c_4073
http://aims.fao.org/aos/agrovoc/c_8227
http://aims.fao.org/aos/agrovoc/c_7701
http://aims.fao.org/aos/agrovoc/c_8355
http://aims.fao.org/aos/agrovoc/c_4510
http://aims.fao.org/aos/agrovoc/c_3423
author This, Dominique
Comstock, Jonathan
Courtois, Brigitte
Xu, Yunbi
Ahmadi, Nourollah
Vonhof, Wendy M
Fleet, Christine
Setter, Tim
Mc Couch, Susan R.
author_facet This, Dominique
Comstock, Jonathan
Courtois, Brigitte
Xu, Yunbi
Ahmadi, Nourollah
Vonhof, Wendy M
Fleet, Christine
Setter, Tim
Mc Couch, Susan R.
author_sort This, Dominique
title Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level
title_short Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level
title_full Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level
title_fullStr Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level
title_full_unstemmed Genetic analysis of water use efficiency in Rice Oryza sativa at the leaf level
title_sort genetic analysis of water use efficiency in rice oryza sativa at the leaf level
url http://agritrop.cirad.fr/557136/
http://agritrop.cirad.fr/557136/1/document_557136.pdf
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