Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis

The active transport of the plant hormone auxin plays a major role in the initiation of organs at the shoot apex. Polar localized membrane proteins of the PIN1 family facilitate this transport, and recent observations suggest that auxin maxima created by these proteins are at the basis of organ initiation. This hypothesis is based on the visual, qualitative characterization of the complex distribution patterns of the PIN1 protein in Arabidopsis. To take these analyses further, we investigated the properties of the patterns using computational modeling. The simulations reveal previously undescribed properties of PIN1 distribution. In particular, they suggest an important role for the meristem summit in the distribution of auxin. We confirm these predictions by further, experimentation and propose a detailed model for the dynamics of auxin fluxes at the shoot apex.

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Main Authors: Barbier de Reuille, Pierre, Bohn-Courseau, Isabelle, Ljung, Karin, Morin, Halima, Carraro, Nicola, Godin, Christophe, Traas, Jan
Format: article biblioteca
Language:eng
Subjects:F62 - Physiologie végétale - Croissance et développement, U10 - Informatique, mathématiques et statistiques, Arabidopsis, pousse, méristème apical, auxine, modèle mathématique, physiologie végétale, cellule, substance de croissance végétale, http://aims.fao.org/aos/agrovoc/c_33291, http://aims.fao.org/aos/agrovoc/c_14261, http://aims.fao.org/aos/agrovoc/c_528, http://aims.fao.org/aos/agrovoc/c_726, http://aims.fao.org/aos/agrovoc/c_24199, http://aims.fao.org/aos/agrovoc/c_25189, http://aims.fao.org/aos/agrovoc/c_1418, http://aims.fao.org/aos/agrovoc/c_5968,
Online Access:http://agritrop.cirad.fr/532470/
http://agritrop.cirad.fr/532470/1/document_532470.pdf
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spelling dig-cirad-fr-5324702024-01-28T14:34:19Z http://agritrop.cirad.fr/532470/ http://agritrop.cirad.fr/532470/ Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis. Barbier de Reuille Pierre, Bohn-Courseau Isabelle, Ljung Karin, Morin Halima, Carraro Nicola, Godin Christophe, Traas Jan. 2006. Proceedings of the National Academy of Sciences of the United States of America, 103 (5) : 1627-1632.https://doi.org/10.1073/pnas.0510130103 <https://doi.org/10.1073/pnas.0510130103> Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis Barbier de Reuille, Pierre Bohn-Courseau, Isabelle Ljung, Karin Morin, Halima Carraro, Nicola Godin, Christophe Traas, Jan eng 2006 Proceedings of the National Academy of Sciences of the United States of America F62 - Physiologie végétale - Croissance et développement U10 - Informatique, mathématiques et statistiques Arabidopsis pousse méristème apical auxine modèle mathématique physiologie végétale cellule substance de croissance végétale http://aims.fao.org/aos/agrovoc/c_33291 http://aims.fao.org/aos/agrovoc/c_14261 http://aims.fao.org/aos/agrovoc/c_528 http://aims.fao.org/aos/agrovoc/c_726 http://aims.fao.org/aos/agrovoc/c_24199 http://aims.fao.org/aos/agrovoc/c_25189 http://aims.fao.org/aos/agrovoc/c_1418 http://aims.fao.org/aos/agrovoc/c_5968 The active transport of the plant hormone auxin plays a major role in the initiation of organs at the shoot apex. Polar localized membrane proteins of the PIN1 family facilitate this transport, and recent observations suggest that auxin maxima created by these proteins are at the basis of organ initiation. This hypothesis is based on the visual, qualitative characterization of the complex distribution patterns of the PIN1 protein in Arabidopsis. To take these analyses further, we investigated the properties of the patterns using computational modeling. The simulations reveal previously undescribed properties of PIN1 distribution. In particular, they suggest an important role for the meristem summit in the distribution of auxin. We confirm these predictions by further, experimentation and propose a detailed model for the dynamics of auxin fluxes at the shoot apex. article info:eu-repo/semantics/article Journal Article info:eu-repo/semantics/publishedVersion http://agritrop.cirad.fr/532470/1/document_532470.pdf application/pdf Cirad license info:eu-repo/semantics/restrictedAccess https://agritrop.cirad.fr/mention_legale.html https://doi.org/10.1073/pnas.0510130103 10.1073/pnas.0510130103 info:eu-repo/semantics/altIdentifier/doi/10.1073/pnas.0510130103 info:eu-repo/semantics/altIdentifier/purl/https://doi.org/10.1073/pnas.0510130103
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F62 - Physiologie végétale - Croissance et développement
U10 - Informatique, mathématiques et statistiques
Arabidopsis
pousse
méristème apical
auxine
modèle mathématique
physiologie végétale
cellule
substance de croissance végétale
http://aims.fao.org/aos/agrovoc/c_33291
http://aims.fao.org/aos/agrovoc/c_14261
http://aims.fao.org/aos/agrovoc/c_528
http://aims.fao.org/aos/agrovoc/c_726
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_1418
http://aims.fao.org/aos/agrovoc/c_5968
F62 - Physiologie végétale - Croissance et développement
U10 - Informatique, mathématiques et statistiques
Arabidopsis
pousse
méristème apical
auxine
modèle mathématique
physiologie végétale
cellule
substance de croissance végétale
http://aims.fao.org/aos/agrovoc/c_33291
http://aims.fao.org/aos/agrovoc/c_14261
http://aims.fao.org/aos/agrovoc/c_528
http://aims.fao.org/aos/agrovoc/c_726
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_1418
http://aims.fao.org/aos/agrovoc/c_5968
spellingShingle F62 - Physiologie végétale - Croissance et développement
U10 - Informatique, mathématiques et statistiques
Arabidopsis
pousse
méristème apical
auxine
modèle mathématique
physiologie végétale
cellule
substance de croissance végétale
http://aims.fao.org/aos/agrovoc/c_33291
http://aims.fao.org/aos/agrovoc/c_14261
http://aims.fao.org/aos/agrovoc/c_528
http://aims.fao.org/aos/agrovoc/c_726
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_1418
http://aims.fao.org/aos/agrovoc/c_5968
F62 - Physiologie végétale - Croissance et développement
U10 - Informatique, mathématiques et statistiques
Arabidopsis
pousse
méristème apical
auxine
modèle mathématique
physiologie végétale
cellule
substance de croissance végétale
http://aims.fao.org/aos/agrovoc/c_33291
http://aims.fao.org/aos/agrovoc/c_14261
http://aims.fao.org/aos/agrovoc/c_528
http://aims.fao.org/aos/agrovoc/c_726
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_1418
http://aims.fao.org/aos/agrovoc/c_5968
Barbier de Reuille, Pierre
Bohn-Courseau, Isabelle
Ljung, Karin
Morin, Halima
Carraro, Nicola
Godin, Christophe
Traas, Jan
Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis
description The active transport of the plant hormone auxin plays a major role in the initiation of organs at the shoot apex. Polar localized membrane proteins of the PIN1 family facilitate this transport, and recent observations suggest that auxin maxima created by these proteins are at the basis of organ initiation. This hypothesis is based on the visual, qualitative characterization of the complex distribution patterns of the PIN1 protein in Arabidopsis. To take these analyses further, we investigated the properties of the patterns using computational modeling. The simulations reveal previously undescribed properties of PIN1 distribution. In particular, they suggest an important role for the meristem summit in the distribution of auxin. We confirm these predictions by further, experimentation and propose a detailed model for the dynamics of auxin fluxes at the shoot apex.
format article
topic_facet F62 - Physiologie végétale - Croissance et développement
U10 - Informatique, mathématiques et statistiques
Arabidopsis
pousse
méristème apical
auxine
modèle mathématique
physiologie végétale
cellule
substance de croissance végétale
http://aims.fao.org/aos/agrovoc/c_33291
http://aims.fao.org/aos/agrovoc/c_14261
http://aims.fao.org/aos/agrovoc/c_528
http://aims.fao.org/aos/agrovoc/c_726
http://aims.fao.org/aos/agrovoc/c_24199
http://aims.fao.org/aos/agrovoc/c_25189
http://aims.fao.org/aos/agrovoc/c_1418
http://aims.fao.org/aos/agrovoc/c_5968
author Barbier de Reuille, Pierre
Bohn-Courseau, Isabelle
Ljung, Karin
Morin, Halima
Carraro, Nicola
Godin, Christophe
Traas, Jan
author_facet Barbier de Reuille, Pierre
Bohn-Courseau, Isabelle
Ljung, Karin
Morin, Halima
Carraro, Nicola
Godin, Christophe
Traas, Jan
author_sort Barbier de Reuille, Pierre
title Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis
title_short Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis
title_full Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis
title_fullStr Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis
title_full_unstemmed Computer simulations reveal properties of the cell-cell signaling network at the shoot apex in Arabidopsis
title_sort computer simulations reveal properties of the cell-cell signaling network at the shoot apex in arabidopsis
url http://agritrop.cirad.fr/532470/
http://agritrop.cirad.fr/532470/1/document_532470.pdf
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