Integration of AFLP markers into an RFLP linkage map of sorghum

The AFLP technique has been applied in establishing an extended linkage map of sorghum. Twelve couples of primers yielded in total, 1380 bands out of which 181 were polymorphic in a 110 recombinant inbred lines population. Finally the AFLP linkage map of 892 cM consists of 147 loci distributed in 11 linkage groups, 34 markers remained independent. The AFLP loci were evenly distributed over the 11 linkage groups except the linkage groupe where the number of AFLPs is lower. The integration of AFLPs into an existing linkage map based on RFLP markers led to: - an increase of the length map (1886 cM versus 1350 cM for the RFLP map); - no disturbance in the original order of the RFLP markers. However, the order of AFLPs within the mixed linkage groups was slightly different; - in most cases, AFLP clusters filled in regions poorly marked or corresponding to earlier gaps. The results are discussed with possible applications of AFLP markers for accelerating a QTL-analysis and marker-assisted backcrossing. (Texte intégral)

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Bibliographic Details
Main Authors: Boivin, Karine, Deu, Monique, Trouche, Gilles, Hamon, Perla
Format: conference_item biblioteca
Language:eng
Published: s.n.
Subjects:F30 - Génétique et amélioration des plantes, Sorghum, marqueur génétique, carte génétique, polymorphisme génétique, RFLP, http://aims.fao.org/aos/agrovoc/c_7244, http://aims.fao.org/aos/agrovoc/c_24030, http://aims.fao.org/aos/agrovoc/c_24002, http://aims.fao.org/aos/agrovoc/c_24031, http://aims.fao.org/aos/agrovoc/c_34255,
Online Access:http://agritrop.cirad.fr/390030/
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spelling dig-cirad-fr-3900302024-01-27T23:11:56Z http://agritrop.cirad.fr/390030/ http://agritrop.cirad.fr/390030/ Integration of AFLP markers into an RFLP linkage map of sorghum. Boivin Karine, Deu Monique, Trouche Gilles, Hamon Perla. 1998. . s.l. : s.n., Résumé Plant and Animal Genomes Conference. 6, San Diego, États-Unis, 18 Janvier 1998/22 Janvier 1998.http://www.intl-pag.org/6/abstracts/bovin.html <http://www.intl-pag.org/6/abstracts/bovin.html> Integration of AFLP markers into an RFLP linkage map of sorghum Boivin, Karine Deu, Monique Trouche, Gilles Hamon, Perla eng 1998 s.n. F30 - Génétique et amélioration des plantes Sorghum marqueur génétique carte génétique polymorphisme génétique RFLP http://aims.fao.org/aos/agrovoc/c_7244 http://aims.fao.org/aos/agrovoc/c_24030 http://aims.fao.org/aos/agrovoc/c_24002 http://aims.fao.org/aos/agrovoc/c_24031 http://aims.fao.org/aos/agrovoc/c_34255 The AFLP technique has been applied in establishing an extended linkage map of sorghum. Twelve couples of primers yielded in total, 1380 bands out of which 181 were polymorphic in a 110 recombinant inbred lines population. Finally the AFLP linkage map of 892 cM consists of 147 loci distributed in 11 linkage groups, 34 markers remained independent. The AFLP loci were evenly distributed over the 11 linkage groups except the linkage groupe where the number of AFLPs is lower. The integration of AFLPs into an existing linkage map based on RFLP markers led to: - an increase of the length map (1886 cM versus 1350 cM for the RFLP map); - no disturbance in the original order of the RFLP markers. However, the order of AFLPs within the mixed linkage groups was slightly different; - in most cases, AFLP clusters filled in regions poorly marked or corresponding to earlier gaps. The results are discussed with possible applications of AFLP markers for accelerating a QTL-analysis and marker-assisted backcrossing. (Texte intégral) conference_item info:eu-repo/semantics/conferenceObject Conference info:eu-repo/semantics/closedAccess http://www.intl-pag.org/6/abstracts/bovin.html http://catalogue-bibliotheques.cirad.fr/cgi-bin/koha/opac-detail.pl?biblionumber=175628 info:eu-repo/semantics/altIdentifier/purl/http://www.intl-pag.org/6/abstracts/bovin.html
institution CIRAD FR
collection DSpace
country Francia
countrycode FR
component Bibliográfico
access En linea
databasecode dig-cirad-fr
tag biblioteca
region Europa del Oeste
libraryname Biblioteca del CIRAD Francia
language eng
topic F30 - Génétique et amélioration des plantes
Sorghum
marqueur génétique
carte génétique
polymorphisme génétique
RFLP
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_34255
F30 - Génétique et amélioration des plantes
Sorghum
marqueur génétique
carte génétique
polymorphisme génétique
RFLP
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_34255
spellingShingle F30 - Génétique et amélioration des plantes
Sorghum
marqueur génétique
carte génétique
polymorphisme génétique
RFLP
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_34255
F30 - Génétique et amélioration des plantes
Sorghum
marqueur génétique
carte génétique
polymorphisme génétique
RFLP
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_34255
Boivin, Karine
Deu, Monique
Trouche, Gilles
Hamon, Perla
Integration of AFLP markers into an RFLP linkage map of sorghum
description The AFLP technique has been applied in establishing an extended linkage map of sorghum. Twelve couples of primers yielded in total, 1380 bands out of which 181 were polymorphic in a 110 recombinant inbred lines population. Finally the AFLP linkage map of 892 cM consists of 147 loci distributed in 11 linkage groups, 34 markers remained independent. The AFLP loci were evenly distributed over the 11 linkage groups except the linkage groupe where the number of AFLPs is lower. The integration of AFLPs into an existing linkage map based on RFLP markers led to: - an increase of the length map (1886 cM versus 1350 cM for the RFLP map); - no disturbance in the original order of the RFLP markers. However, the order of AFLPs within the mixed linkage groups was slightly different; - in most cases, AFLP clusters filled in regions poorly marked or corresponding to earlier gaps. The results are discussed with possible applications of AFLP markers for accelerating a QTL-analysis and marker-assisted backcrossing. (Texte intégral)
format conference_item
topic_facet F30 - Génétique et amélioration des plantes
Sorghum
marqueur génétique
carte génétique
polymorphisme génétique
RFLP
http://aims.fao.org/aos/agrovoc/c_7244
http://aims.fao.org/aos/agrovoc/c_24030
http://aims.fao.org/aos/agrovoc/c_24002
http://aims.fao.org/aos/agrovoc/c_24031
http://aims.fao.org/aos/agrovoc/c_34255
author Boivin, Karine
Deu, Monique
Trouche, Gilles
Hamon, Perla
author_facet Boivin, Karine
Deu, Monique
Trouche, Gilles
Hamon, Perla
author_sort Boivin, Karine
title Integration of AFLP markers into an RFLP linkage map of sorghum
title_short Integration of AFLP markers into an RFLP linkage map of sorghum
title_full Integration of AFLP markers into an RFLP linkage map of sorghum
title_fullStr Integration of AFLP markers into an RFLP linkage map of sorghum
title_full_unstemmed Integration of AFLP markers into an RFLP linkage map of sorghum
title_sort integration of aflp markers into an rflp linkage map of sorghum
publisher s.n.
url http://agritrop.cirad.fr/390030/
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AT hamonperla integrationofaflpmarkersintoanrflplinkagemapofsorghum
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