Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis

Stripe rust, caused by Puccinia striiformis f. sp. tritici, is one of the most widespread and destructive wheat diseases worldwide. Growing resistant cultivars with adult-plant resistance (APR) is an effective approach for the control of the disease. In this study, 540 simple sequence repeat markers were screened to map quantitative trait loci (QTL) for APR to stripe rust in a doubled haploid (DH) population of 137 lines derived from the cross Pingyuan 50 × Mingxian 169. The DH lines were planted in randomized complete blocks with three replicates in Gansu and Sichuan provinces during the 2005?06, 2006?07, and 2007?08 cropping seasons, providing data for four environments. Artificial inoculations were carried out in Gansu and Sichuan with the prevalent Chinese race CYR32. Broad-sense heritability of resistance to stripe rust for maximum disease severity was 0.91, based on the mean value averaged across four environments. Inclusive composite interval mapping detected three QTL for APR to stripe rust on chromosomes 2BS, 5AL, and 6BS, designated QYr.caas-2BS, QYr.caas-5AL, and QYr.caas-6BS, respectively, separately explaining from 4.5 to 19.9% of the phenotypic variation. QYr.caas-5AL, different from QTL previously reported, was flanked by microsatellite markers Xwmc410 and Xbarc261, and accounted for 5.0 to 19.9% of phenotypic variance. Molecular markers closely linked to the QTL could be used in marker-assisted selection for APR to stripe rust in wheat breeding programs.

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Main Authors: Caixia Lan, Shanshan Liang, Xiangchun Zhou, Gang Zhou, Qinglin Lu, Xianchun Xia, He Zhonghu
Format: Article biblioteca
Language:English
Published: American Phytopathological Society (APS) 2010
Subjects:AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, Durable Resistance, PUCCINIA STRIIFORMIS, RUSTS, DISEASE RESISTANCE, MICROSATELLITES, TRITICUM AESTIVUM, QUANTITATIVE TRAIT LOCI, CHROMOSOME MAPPING,
Online Access:http://hdl.handle.net/10883/2797
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spelling dig-cimmyt-10883-27972024-03-13T17:24:28Z Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis Caixia Lan Shanshan Liang Xiangchun Zhou Gang Zhou Qinglin Lu Xianchun Xia He Zhonghu AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Durable Resistance PUCCINIA STRIIFORMIS RUSTS DISEASE RESISTANCE MICROSATELLITES TRITICUM AESTIVUM QUANTITATIVE TRAIT LOCI CHROMOSOME MAPPING Stripe rust, caused by Puccinia striiformis f. sp. tritici, is one of the most widespread and destructive wheat diseases worldwide. Growing resistant cultivars with adult-plant resistance (APR) is an effective approach for the control of the disease. In this study, 540 simple sequence repeat markers were screened to map quantitative trait loci (QTL) for APR to stripe rust in a doubled haploid (DH) population of 137 lines derived from the cross Pingyuan 50 × Mingxian 169. The DH lines were planted in randomized complete blocks with three replicates in Gansu and Sichuan provinces during the 2005?06, 2006?07, and 2007?08 cropping seasons, providing data for four environments. Artificial inoculations were carried out in Gansu and Sichuan with the prevalent Chinese race CYR32. Broad-sense heritability of resistance to stripe rust for maximum disease severity was 0.91, based on the mean value averaged across four environments. Inclusive composite interval mapping detected three QTL for APR to stripe rust on chromosomes 2BS, 5AL, and 6BS, designated QYr.caas-2BS, QYr.caas-5AL, and QYr.caas-6BS, respectively, separately explaining from 4.5 to 19.9% of the phenotypic variation. QYr.caas-5AL, different from QTL previously reported, was flanked by microsatellite markers Xwmc410 and Xbarc261, and accounted for 5.0 to 19.9% of phenotypic variance. Molecular markers closely linked to the QTL could be used in marker-assisted selection for APR to stripe rust in wheat breeding programs. 313-318 2013-06-07T21:12:38Z 2013-06-07T21:12:38Z 2010 Article 0031-949X http://hdl.handle.net/10883/2797 10.1094/PHYTO-100-4-0313 English CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose. Open Access PDF China American Phytopathological Society (APS) 4 100 Phytopathology
institution CIMMYT
collection DSpace
country México
countrycode MX
component Bibliográfico
access En linea
databasecode dig-cimmyt
tag biblioteca
region America del Norte
libraryname CIMMYT Library
language English
topic AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Durable Resistance
PUCCINIA STRIIFORMIS
RUSTS
DISEASE RESISTANCE
MICROSATELLITES
TRITICUM AESTIVUM
QUANTITATIVE TRAIT LOCI
CHROMOSOME MAPPING
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Durable Resistance
PUCCINIA STRIIFORMIS
RUSTS
DISEASE RESISTANCE
MICROSATELLITES
TRITICUM AESTIVUM
QUANTITATIVE TRAIT LOCI
CHROMOSOME MAPPING
spellingShingle AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Durable Resistance
PUCCINIA STRIIFORMIS
RUSTS
DISEASE RESISTANCE
MICROSATELLITES
TRITICUM AESTIVUM
QUANTITATIVE TRAIT LOCI
CHROMOSOME MAPPING
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Durable Resistance
PUCCINIA STRIIFORMIS
RUSTS
DISEASE RESISTANCE
MICROSATELLITES
TRITICUM AESTIVUM
QUANTITATIVE TRAIT LOCI
CHROMOSOME MAPPING
Caixia Lan
Shanshan Liang
Xiangchun Zhou
Gang Zhou
Qinglin Lu
Xianchun Xia
He Zhonghu
Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis
description Stripe rust, caused by Puccinia striiformis f. sp. tritici, is one of the most widespread and destructive wheat diseases worldwide. Growing resistant cultivars with adult-plant resistance (APR) is an effective approach for the control of the disease. In this study, 540 simple sequence repeat markers were screened to map quantitative trait loci (QTL) for APR to stripe rust in a doubled haploid (DH) population of 137 lines derived from the cross Pingyuan 50 × Mingxian 169. The DH lines were planted in randomized complete blocks with three replicates in Gansu and Sichuan provinces during the 2005?06, 2006?07, and 2007?08 cropping seasons, providing data for four environments. Artificial inoculations were carried out in Gansu and Sichuan with the prevalent Chinese race CYR32. Broad-sense heritability of resistance to stripe rust for maximum disease severity was 0.91, based on the mean value averaged across four environments. Inclusive composite interval mapping detected three QTL for APR to stripe rust on chromosomes 2BS, 5AL, and 6BS, designated QYr.caas-2BS, QYr.caas-5AL, and QYr.caas-6BS, respectively, separately explaining from 4.5 to 19.9% of the phenotypic variation. QYr.caas-5AL, different from QTL previously reported, was flanked by microsatellite markers Xwmc410 and Xbarc261, and accounted for 5.0 to 19.9% of phenotypic variance. Molecular markers closely linked to the QTL could be used in marker-assisted selection for APR to stripe rust in wheat breeding programs.
format Article
topic_facet AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Durable Resistance
PUCCINIA STRIIFORMIS
RUSTS
DISEASE RESISTANCE
MICROSATELLITES
TRITICUM AESTIVUM
QUANTITATIVE TRAIT LOCI
CHROMOSOME MAPPING
author Caixia Lan
Shanshan Liang
Xiangchun Zhou
Gang Zhou
Qinglin Lu
Xianchun Xia
He Zhonghu
author_facet Caixia Lan
Shanshan Liang
Xiangchun Zhou
Gang Zhou
Qinglin Lu
Xianchun Xia
He Zhonghu
author_sort Caixia Lan
title Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis
title_short Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis
title_full Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis
title_fullStr Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis
title_full_unstemmed Identification of genomic regions controlling adult-plant stripe rust resistance in Chinese Landrace Pingyuan 50 through bulked segregant analysis
title_sort identification of genomic regions controlling adult-plant stripe rust resistance in chinese landrace pingyuan 50 through bulked segregant analysis
publisher American Phytopathological Society (APS)
publishDate 2010
url http://hdl.handle.net/10883/2797
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AT xiangchunzhou identificationofgenomicregionscontrollingadultplantstriperustresistanceinchineselandracepingyuan50throughbulkedsegregantanalysis
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