Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’

Background: Septoria tritici blotch (STB), caused by Zymoseptoria tritici (Z. tritici), is an important biotic threat to durum wheat in the entire Mediterranean Basin. Although most durum wheat cultivars are susceptible to Z. tritici, research in STB resistance in durum wheat has been limited. Results: In our study, we have identified resistance to a wide array of Z. tritici isolates in the Tunisian durum wheat landrace accession ‘Agili39’. Subsequently, a recombinant inbred population was developed and tested under greenhouse conditions at the seedling stage with eight Z. tritici isolates and for five years under field conditions with three Z. tritici isolates. Mapping of quantitative trait loci (QTL) resulted in the identification of two major QTL on chromosome 2B designated as Qstb2B_1 and Qstb2B_2. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6 %), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42 %) and has been effective at the field trials against two Z. tritici isolates. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6 %), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42 %) and has been effective at the field trials against two Z. tritici. The physical positions of the flanking markers linked to Qstb2B_1 and Qstb2B_2 indicate that these two QTL are 5Mb apart. In addition, we identified two minor QTL on chromosomes 1A (Qstb1A) and chromosome 7A (Qstb7A) (highest LODs 4.6 and 4.0, and explained variances of 16 % and 9%, respectively) that were specific to three and one Z. tritici isolates, respectively. All identified QTL were derived from the landrace accession Agili39 that represents a valuable source for STB resistance in durum wheat. Conclusion: This study demonstrates that Z. tritici resistance in the ‘Agili39’ landrace accession is controlled by two minor and two major QTL acting in an additive mode.

Saved in:
Bibliographic Details
Main Authors: Ferjaoui, S., Aouini, L., Ben Slimane, R., Ammar, K., Dreisigacker, S., Schouten, H.J., Sapkota, S., Bahri, B., Ben M’Barek, S., Visser, R.G.F., Kema, G., Hamza, S.
Format: Article biblioteca
Language:English
Published: BioMed Central 2022
Subjects:AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, HARD WHEAT, LANDRACES, MYCOSPHAERELLA GRAMINICOLA, QUANTITATIVE TRAIT LOCI, GENES,
Online Access:https://hdl.handle.net/10883/21710
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cimmyt-10883-21710
record_format koha
spelling dig-cimmyt-10883-217102023-08-02T16:26:09Z Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’ Ferjaoui, S. Aouini, L. Ben Slimane, R. Ammar, K. Dreisigacker, S. Schouten, H.J. Sapkota, S. Bahri, B. Ben M’Barek, S. Visser, R.G.F. Kema, G. Hamza, S. AGRICULTURAL SCIENCES AND BIOTECHNOLOGY HARD WHEAT LANDRACES MYCOSPHAERELLA GRAMINICOLA QUANTITATIVE TRAIT LOCI GENES Background: Septoria tritici blotch (STB), caused by Zymoseptoria tritici (Z. tritici), is an important biotic threat to durum wheat in the entire Mediterranean Basin. Although most durum wheat cultivars are susceptible to Z. tritici, research in STB resistance in durum wheat has been limited. Results: In our study, we have identified resistance to a wide array of Z. tritici isolates in the Tunisian durum wheat landrace accession ‘Agili39’. Subsequently, a recombinant inbred population was developed and tested under greenhouse conditions at the seedling stage with eight Z. tritici isolates and for five years under field conditions with three Z. tritici isolates. Mapping of quantitative trait loci (QTL) resulted in the identification of two major QTL on chromosome 2B designated as Qstb2B_1 and Qstb2B_2. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6 %), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42 %) and has been effective at the field trials against two Z. tritici isolates. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6 %), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42 %) and has been effective at the field trials against two Z. tritici. The physical positions of the flanking markers linked to Qstb2B_1 and Qstb2B_2 indicate that these two QTL are 5Mb apart. In addition, we identified two minor QTL on chromosomes 1A (Qstb1A) and chromosome 7A (Qstb7A) (highest LODs 4.6 and 4.0, and explained variances of 16 % and 9%, respectively) that were specific to three and one Z. tritici isolates, respectively. All identified QTL were derived from the landrace accession Agili39 that represents a valuable source for STB resistance in durum wheat. Conclusion: This study demonstrates that Z. tritici resistance in the ‘Agili39’ landrace accession is controlled by two minor and two major QTL acting in an additive mode. 2021-10-27T00:20:30Z 2021-10-27T00:20:30Z 2022 Article Published Version https://hdl.handle.net/10883/21710 10.1186/s12864-022-08560-2 English Nutrition, health & food security Accelerated Breeding Genetic Innovation Japan International Cooperation Agency Japan Science and Technology Agency Science Technology Research Partnership for Sustainable Development https://hdl.handle.net/10568/126555 CIMMYT manages Intellectual Assets as International Public Goods. The user is free to download, print, store and share this work. In case you want to translate or create any other derivative work and share or distribute such translation/derivative work, please contact CIMMYT-Knowledge-Center@cgiar.org indicating the work you want to use and the kind of use you intend; CIMMYT will contact you with the suitable license for that purpose Open Access London (United Kingdom) BioMed Central 23 1471-2164 BMC Genomics 372
institution CIMMYT
collection DSpace
country México
countrycode MX
component Bibliográfico
access En linea
databasecode dig-cimmyt
tag biblioteca
region America del Norte
libraryname CIMMYT Library
language English
topic AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
HARD WHEAT
LANDRACES
MYCOSPHAERELLA GRAMINICOLA
QUANTITATIVE TRAIT LOCI
GENES
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
HARD WHEAT
LANDRACES
MYCOSPHAERELLA GRAMINICOLA
QUANTITATIVE TRAIT LOCI
GENES
spellingShingle AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
HARD WHEAT
LANDRACES
MYCOSPHAERELLA GRAMINICOLA
QUANTITATIVE TRAIT LOCI
GENES
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
HARD WHEAT
LANDRACES
MYCOSPHAERELLA GRAMINICOLA
QUANTITATIVE TRAIT LOCI
GENES
Ferjaoui, S.
Aouini, L.
Ben Slimane, R.
Ammar, K.
Dreisigacker, S.
Schouten, H.J.
Sapkota, S.
Bahri, B.
Ben M’Barek, S.
Visser, R.G.F.
Kema, G.
Hamza, S.
Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’
description Background: Septoria tritici blotch (STB), caused by Zymoseptoria tritici (Z. tritici), is an important biotic threat to durum wheat in the entire Mediterranean Basin. Although most durum wheat cultivars are susceptible to Z. tritici, research in STB resistance in durum wheat has been limited. Results: In our study, we have identified resistance to a wide array of Z. tritici isolates in the Tunisian durum wheat landrace accession ‘Agili39’. Subsequently, a recombinant inbred population was developed and tested under greenhouse conditions at the seedling stage with eight Z. tritici isolates and for five years under field conditions with three Z. tritici isolates. Mapping of quantitative trait loci (QTL) resulted in the identification of two major QTL on chromosome 2B designated as Qstb2B_1 and Qstb2B_2. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6 %), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42 %) and has been effective at the field trials against two Z. tritici isolates. The Qstb2B_1 QTL was mapped at the seedling and the adult plant stage (highest LOD 33.9, explained variance 61.6 %), conferring an effective resistance against five Z. tritici isolates. The Qstb2B_2 conferred adult plant resistance (highest LOD 32.9, explained variance 42 %) and has been effective at the field trials against two Z. tritici. The physical positions of the flanking markers linked to Qstb2B_1 and Qstb2B_2 indicate that these two QTL are 5Mb apart. In addition, we identified two minor QTL on chromosomes 1A (Qstb1A) and chromosome 7A (Qstb7A) (highest LODs 4.6 and 4.0, and explained variances of 16 % and 9%, respectively) that were specific to three and one Z. tritici isolates, respectively. All identified QTL were derived from the landrace accession Agili39 that represents a valuable source for STB resistance in durum wheat. Conclusion: This study demonstrates that Z. tritici resistance in the ‘Agili39’ landrace accession is controlled by two minor and two major QTL acting in an additive mode.
format Article
topic_facet AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
HARD WHEAT
LANDRACES
MYCOSPHAERELLA GRAMINICOLA
QUANTITATIVE TRAIT LOCI
GENES
author Ferjaoui, S.
Aouini, L.
Ben Slimane, R.
Ammar, K.
Dreisigacker, S.
Schouten, H.J.
Sapkota, S.
Bahri, B.
Ben M’Barek, S.
Visser, R.G.F.
Kema, G.
Hamza, S.
author_facet Ferjaoui, S.
Aouini, L.
Ben Slimane, R.
Ammar, K.
Dreisigacker, S.
Schouten, H.J.
Sapkota, S.
Bahri, B.
Ben M’Barek, S.
Visser, R.G.F.
Kema, G.
Hamza, S.
author_sort Ferjaoui, S.
title Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’
title_short Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’
title_full Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’
title_fullStr Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’
title_full_unstemmed Deciphering resistance to Zymoseptoria tritici in the Tunisian durum wheat landrace accession ‘Agili39’
title_sort deciphering resistance to zymoseptoria tritici in the tunisian durum wheat landrace accession ‘agili39’
publisher BioMed Central
publishDate 2022
url https://hdl.handle.net/10883/21710
work_keys_str_mv AT ferjaouis decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT aouinil decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT benslimaner decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT ammark decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT dreisigackers decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT schoutenhj decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT sapkotas decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT bahrib decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT benmbareks decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT visserrgf decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT kemag decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
AT hamzas decipheringresistancetozymoseptoriatriticiinthetunisiandurumwheatlandraceaccessionagili39
_version_ 1773582080293208064