The genetic dissection of quantitative traits in crops

Most traits of interest in plant breeding show quantitative inheritance, which complicate the breeding process since phenotypic performances only partially reflects the genetic values of individuals. The genetic variation of a quantitative trait is assumed to be controlled by the collective effects of quantitative trait loci (QTLs), epistasis (interaction between QTLs), the environment, and interaction between QTL and environment. Exploiting molecular markers in breeding involve finding a subset of markers associated with one or more QTLs that regulate the expression of complex traits. Many QTL mapping studies conducted in the last two decades identified QTLs that generally explained a significant proportion of the phenotypic variance, and therefore, gave rise to an optimistic assessment of the prospects of markers assisted selection. Linkage analysis and association mapping are the two most commonly used methods for QTL mapping. This review provides an overview of the two QTL mapping methods, including mapping population type and size, phenotypic evaluation of the population, molecular profiling of either the entire or a subset of the population, marker-trait association analysis using different statistical methods and software as well as the future prospects of using markers in crop improvement.

Saved in:
Bibliographic Details
Main Authors: Fentaye Kassa Semagn, Bjornstad, A., Yunbi Xu
Format: Article biblioteca
Language:English
Published: Pontificia Universidad Católica de Valparaíso 2010
Subjects:AGRICULTURAL SCIENCES AND BIOTECHNOLOGY, Molecular Markers, QTL Mapping, QTL Analysis, CHROMOSOME MAPPING, MARKER-ASSISTED SELECTION, MOLECULAR HYBRIDIZATION, GENETIC MARKERS, QUANTITATIVE TRAIT LOCI, LINKAGE DISEQUILIBRIUM,
Online Access:http://hdl.handle.net/10883/1816
Tags: Add Tag
No Tags, Be the first to tag this record!
id dig-cimmyt-10883-1816
record_format koha
spelling dig-cimmyt-10883-18162023-10-19T17:45:13Z The genetic dissection of quantitative traits in crops Fentaye Kassa Semagn Bjornstad, A. Yunbi Xu AGRICULTURAL SCIENCES AND BIOTECHNOLOGY Molecular Markers QTL Mapping QTL Analysis CHROMOSOME MAPPING MARKER-ASSISTED SELECTION MOLECULAR HYBRIDIZATION GENETIC MARKERS QUANTITATIVE TRAIT LOCI LINKAGE DISEQUILIBRIUM Most traits of interest in plant breeding show quantitative inheritance, which complicate the breeding process since phenotypic performances only partially reflects the genetic values of individuals. The genetic variation of a quantitative trait is assumed to be controlled by the collective effects of quantitative trait loci (QTLs), epistasis (interaction between QTLs), the environment, and interaction between QTL and environment. Exploiting molecular markers in breeding involve finding a subset of markers associated with one or more QTLs that regulate the expression of complex traits. Many QTL mapping studies conducted in the last two decades identified QTLs that generally explained a significant proportion of the phenotypic variance, and therefore, gave rise to an optimistic assessment of the prospects of markers assisted selection. Linkage analysis and association mapping are the two most commonly used methods for QTL mapping. This review provides an overview of the two QTL mapping methods, including mapping population type and size, phenotypic evaluation of the population, molecular profiling of either the entire or a subset of the population, marker-trait association analysis using different statistical methods and software as well as the future prospects of using markers in crop improvement. 1-45 pages 2013-06-07T21:02:43Z 2013-06-07T21:02:43Z 2010 Article 0717-3458 http://hdl.handle.net/10883/1816 10.2225/vol13-issue5-fulltext-14 English Open Access PDF Pontificia Universidad Católica de Valparaíso http://www.ejbiotechnology.info/index.php/ejbiotechnology/article/view/v13n5-14 5 13 Electronic Journal of Biotechnology
institution CIMMYT
collection DSpace
country México
countrycode MX
component Bibliográfico
access En linea
databasecode dig-cimmyt
tag biblioteca
region America del Norte
libraryname CIMMYT Library
language English
topic AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Molecular Markers
QTL Mapping
QTL Analysis
CHROMOSOME MAPPING
MARKER-ASSISTED SELECTION
MOLECULAR HYBRIDIZATION
GENETIC MARKERS
QUANTITATIVE TRAIT LOCI
LINKAGE DISEQUILIBRIUM
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Molecular Markers
QTL Mapping
QTL Analysis
CHROMOSOME MAPPING
MARKER-ASSISTED SELECTION
MOLECULAR HYBRIDIZATION
GENETIC MARKERS
QUANTITATIVE TRAIT LOCI
LINKAGE DISEQUILIBRIUM
spellingShingle AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Molecular Markers
QTL Mapping
QTL Analysis
CHROMOSOME MAPPING
MARKER-ASSISTED SELECTION
MOLECULAR HYBRIDIZATION
GENETIC MARKERS
QUANTITATIVE TRAIT LOCI
LINKAGE DISEQUILIBRIUM
AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Molecular Markers
QTL Mapping
QTL Analysis
CHROMOSOME MAPPING
MARKER-ASSISTED SELECTION
MOLECULAR HYBRIDIZATION
GENETIC MARKERS
QUANTITATIVE TRAIT LOCI
LINKAGE DISEQUILIBRIUM
Fentaye Kassa Semagn
Bjornstad, A.
Yunbi Xu
The genetic dissection of quantitative traits in crops
description Most traits of interest in plant breeding show quantitative inheritance, which complicate the breeding process since phenotypic performances only partially reflects the genetic values of individuals. The genetic variation of a quantitative trait is assumed to be controlled by the collective effects of quantitative trait loci (QTLs), epistasis (interaction between QTLs), the environment, and interaction between QTL and environment. Exploiting molecular markers in breeding involve finding a subset of markers associated with one or more QTLs that regulate the expression of complex traits. Many QTL mapping studies conducted in the last two decades identified QTLs that generally explained a significant proportion of the phenotypic variance, and therefore, gave rise to an optimistic assessment of the prospects of markers assisted selection. Linkage analysis and association mapping are the two most commonly used methods for QTL mapping. This review provides an overview of the two QTL mapping methods, including mapping population type and size, phenotypic evaluation of the population, molecular profiling of either the entire or a subset of the population, marker-trait association analysis using different statistical methods and software as well as the future prospects of using markers in crop improvement.
format Article
topic_facet AGRICULTURAL SCIENCES AND BIOTECHNOLOGY
Molecular Markers
QTL Mapping
QTL Analysis
CHROMOSOME MAPPING
MARKER-ASSISTED SELECTION
MOLECULAR HYBRIDIZATION
GENETIC MARKERS
QUANTITATIVE TRAIT LOCI
LINKAGE DISEQUILIBRIUM
author Fentaye Kassa Semagn
Bjornstad, A.
Yunbi Xu
author_facet Fentaye Kassa Semagn
Bjornstad, A.
Yunbi Xu
author_sort Fentaye Kassa Semagn
title The genetic dissection of quantitative traits in crops
title_short The genetic dissection of quantitative traits in crops
title_full The genetic dissection of quantitative traits in crops
title_fullStr The genetic dissection of quantitative traits in crops
title_full_unstemmed The genetic dissection of quantitative traits in crops
title_sort genetic dissection of quantitative traits in crops
publisher Pontificia Universidad Católica de Valparaíso
publishDate 2010
url http://hdl.handle.net/10883/1816
work_keys_str_mv AT fentayekassasemagn thegeneticdissectionofquantitativetraitsincrops
AT bjornstada thegeneticdissectionofquantitativetraitsincrops
AT yunbixu thegeneticdissectionofquantitativetraitsincrops
AT fentayekassasemagn geneticdissectionofquantitativetraitsincrops
AT bjornstada geneticdissectionofquantitativetraitsincrops
AT yunbixu geneticdissectionofquantitativetraitsincrops
_version_ 1781883652883349504