Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen

Whilst it is established that almost all cultivated coffee (Coffea arabica L.) varieties originated in Yemen after some coffee seeds were introduced into Yemen from neighboring Ethiopia, the actual coffee genetic diversity in Yemen and its significance to the coffee world had never been explored. We observed five genetic clusters. The first cluster, which we named the Ethiopian-Only (EO) cluster, was made up exclusively of the Ethiopian accessions. This cluster was clearly separated from the Yemen and cultivated varieties clusters, hence confirming the genetic distance between wild Ethiopian accessions and coffee cultivated varieties around the world. The second cluster, which we named the SL-17 cluster, was a small cluster of cultivated worldwide varieties and included no Yemen samples. Two other clusters were made up of worldwide varieties and Yemen samples. We named these the Yemen Typica- Bourbon cluster and the Yemen SL-34 cluster. Finally, we observed one cluster that was unique to Yemen and was not related to any known cultivated varieties and not even to any known Ethiopian accession: we name this cluster the New-Yemen cluster. We discuss the consequences of these findings and their potential to pave the way for further comprehensive genetic improvement projects for the identification of major resilience/adaptation and cup quality genes that have been shaped through the domestication process of C. arabica.

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Bibliographic Details
Main Authors: Montagnon, C., Mahyoub, A., Solano Sánchez, William, Sheibani, F.
Format: Artículo biblioteca
Language:English
Published: 2021
Subjects:COFFEA ARABICA, DIVERSIDAD GENETICA, DOMESTICACION, CULTIVO, SEMILLA, YEMEN, PRODUCTORES DE CAFÉ, DATOS, INGRESOS, PRODUCCION,
Online Access:https://doi.org/10.1007/s10722-021-01139-y
https://repositorio.catie.ac.cr/handle/11554/10332
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spelling dig-catie-11554-103322023-09-14T22:48:08Z Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen Montagnon, C. Mahyoub, A. Solano Sánchez, William Sheibani, F. COFFEA ARABICA DIVERSIDAD GENETICA DOMESTICACION CULTIVO SEMILLA YEMEN PRODUCTORES DE CAFÉ DATOS INGRESOS PRODUCCION Whilst it is established that almost all cultivated coffee (Coffea arabica L.) varieties originated in Yemen after some coffee seeds were introduced into Yemen from neighboring Ethiopia, the actual coffee genetic diversity in Yemen and its significance to the coffee world had never been explored. We observed five genetic clusters. The first cluster, which we named the Ethiopian-Only (EO) cluster, was made up exclusively of the Ethiopian accessions. This cluster was clearly separated from the Yemen and cultivated varieties clusters, hence confirming the genetic distance between wild Ethiopian accessions and coffee cultivated varieties around the world. The second cluster, which we named the SL-17 cluster, was a small cluster of cultivated worldwide varieties and included no Yemen samples. Two other clusters were made up of worldwide varieties and Yemen samples. We named these the Yemen Typica- Bourbon cluster and the Yemen SL-34 cluster. Finally, we observed one cluster that was unique to Yemen and was not related to any known cultivated varieties and not even to any known Ethiopian accession: we name this cluster the New-Yemen cluster. We discuss the consequences of these findings and their potential to pave the way for further comprehensive genetic improvement projects for the identification of major resilience/adaptation and cup quality genes that have been shaped through the domestication process of C. arabica. 2021-02-20T02:52:41Z 2021-02-20T02:52:41Z 2021 Artículo https://doi.org/10.1007/s10722-021-01139-y https://repositorio.catie.ac.cr/handle/11554/10332 en Genetic Resources and Crop Evolution (2021) info:eu-repo/semantics/restrictedAccess application/pdf
institution CATIE
collection DSpace
country Costa Rica
countrycode CR
component Bibliográfico
access En linea
databasecode dig-catie
tag biblioteca
region America Central
libraryname Biblioteca Conmemorativa Orton
language English
topic COFFEA ARABICA
DIVERSIDAD GENETICA
DOMESTICACION
CULTIVO
SEMILLA
YEMEN
PRODUCTORES DE CAFÉ
DATOS
INGRESOS
PRODUCCION
COFFEA ARABICA
DIVERSIDAD GENETICA
DOMESTICACION
CULTIVO
SEMILLA
YEMEN
PRODUCTORES DE CAFÉ
DATOS
INGRESOS
PRODUCCION
spellingShingle COFFEA ARABICA
DIVERSIDAD GENETICA
DOMESTICACION
CULTIVO
SEMILLA
YEMEN
PRODUCTORES DE CAFÉ
DATOS
INGRESOS
PRODUCCION
COFFEA ARABICA
DIVERSIDAD GENETICA
DOMESTICACION
CULTIVO
SEMILLA
YEMEN
PRODUCTORES DE CAFÉ
DATOS
INGRESOS
PRODUCCION
Montagnon, C.
Mahyoub, A.
Solano Sánchez, William
Sheibani, F.
Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
description Whilst it is established that almost all cultivated coffee (Coffea arabica L.) varieties originated in Yemen after some coffee seeds were introduced into Yemen from neighboring Ethiopia, the actual coffee genetic diversity in Yemen and its significance to the coffee world had never been explored. We observed five genetic clusters. The first cluster, which we named the Ethiopian-Only (EO) cluster, was made up exclusively of the Ethiopian accessions. This cluster was clearly separated from the Yemen and cultivated varieties clusters, hence confirming the genetic distance between wild Ethiopian accessions and coffee cultivated varieties around the world. The second cluster, which we named the SL-17 cluster, was a small cluster of cultivated worldwide varieties and included no Yemen samples. Two other clusters were made up of worldwide varieties and Yemen samples. We named these the Yemen Typica- Bourbon cluster and the Yemen SL-34 cluster. Finally, we observed one cluster that was unique to Yemen and was not related to any known cultivated varieties and not even to any known Ethiopian accession: we name this cluster the New-Yemen cluster. We discuss the consequences of these findings and their potential to pave the way for further comprehensive genetic improvement projects for the identification of major resilience/adaptation and cup quality genes that have been shaped through the domestication process of C. arabica.
format Artículo
topic_facet COFFEA ARABICA
DIVERSIDAD GENETICA
DOMESTICACION
CULTIVO
SEMILLA
YEMEN
PRODUCTORES DE CAFÉ
DATOS
INGRESOS
PRODUCCION
author Montagnon, C.
Mahyoub, A.
Solano Sánchez, William
Sheibani, F.
author_facet Montagnon, C.
Mahyoub, A.
Solano Sánchez, William
Sheibani, F.
author_sort Montagnon, C.
title Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
title_short Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
title_full Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
title_fullStr Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
title_full_unstemmed Unveiling a unique genetic diversity of cultivated Coffea arabica L. in its main domestication center: Yemen
title_sort unveiling a unique genetic diversity of cultivated coffea arabica l. in its main domestication center: yemen
publishDate 2021
url https://doi.org/10.1007/s10722-021-01139-y
https://repositorio.catie.ac.cr/handle/11554/10332
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