Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.

In this study, Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDITOF) mass spectrometry was used to identify Mycobacterium bovis from cattle and buffalo tissue isolates from the North and South regions of Brazil, grown in solid medium and previously identified by Polymerase Chain Reaction (PCR) based on Region of Difference 4 (RD4), sequencing and spoligotyping. For this purpose, the protein extraction protocol and the mass spectra reference database were optimized for the identification of 80 clinical isolates of mycobacteria. As a result of this optimization, it was possible to identify and differentiate M. bovis from other members of the Mycobacterium tuberculosis complex with 100% specificity, 90.91% sensitivity and 91.25% reliability. MALDI-TOF MS methodology described herein provides successful identification of M. bovis within bovine/bubaline clinical samples, demonstrating its usefulness for bovine tuberculosis diagnosis in the future.

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Main Authors: BACANELLI, G., OLARTE, L. C., SILVA, M. R., RODRIGUES, R. A., CARNEIRO, P. A. M., KANEENE, J. B., PASQUATTI, T. N., TAKATANI, H., ZUMÁRRAGA, M. J., ETGES, R. N., ARAUJO, F. R., VERBISCK, N. V.
Other Authors: GISELE BACANELLI, Universidade Federal de Mato Grosso do Sul - UFMS/Programa de Pós-Graduação em Biotecnologia e Biodiversidade da Região Centro-Oeste
Format: Artigo de periódico biblioteca
Language:English
eng
Published: 2019-12-30
Subjects:Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry, Bovine tuberculosis, Mycobacterium bovis BCG, Mycobacterium tuberculosis complex,
Online Access:http://www.alice.cnptia.embrapa.br/alice/handle/doc/1117863
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spelling dig-alice-doc-11178632019-12-30T18:11:17Z Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae. BACANELLI, G. OLARTE, L. C. SILVA, M. R. RODRIGUES, R. A. CARNEIRO, P. A. M. KANEENE, J. B. PASQUATTI, T. N. TAKATANI, H. ZUMÁRRAGA, M. J. ETGES, R. N. ARAUJO, F. R. VERBISCK, N. V. GISELE BACANELLI, Universidade Federal de Mato Grosso do Sul - UFMS/Programa de Pós-Graduação em Biotecnologia e Biodiversidade da Região Centro-Oeste RUDIELLE A. RODRIGUES, Universidade Federal de Mato Grosso do Sul - UFMS/Faculdade de Medicina Veterinária/Programa de Pós-Graduação em Ciências Veterinárias PAULO A. M. CARNEIRO, Michigan State University/Center for Comparative Epidemiology JOHN B. KANEENE, Michigan State University/Center for Comparative Epidemiology TAYNARA N. PASQUATTI, Universidade Católica Dom Bosco - UCDB HARUO TAKATANI, Agência de Defesa Agrícola do Amazonas MARTIN J. ZUMÁRRAGA, Institute of Biotechnology, CICVyA/INTA RODRIGO N. ETGES, Secretário de Agricultura, Pecuária e Irrigação de Porto Alegre FLABIO RIBEIRO DE ARAUJO, CNPGC NEWTON VALERIO VERBISCK, CNPGC. LARISSA C. OLARTE, Universidade Federal de Mato Grosso do Sul - UFMS/Programa de Pós-Graduação Multicêntrica em Bioquímica e Biologia Molecular MARCIO ROBERTO SILVA, CNPGL Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry Bovine tuberculosis Mycobacterium bovis BCG Mycobacterium tuberculosis complex In this study, Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDITOF) mass spectrometry was used to identify Mycobacterium bovis from cattle and buffalo tissue isolates from the North and South regions of Brazil, grown in solid medium and previously identified by Polymerase Chain Reaction (PCR) based on Region of Difference 4 (RD4), sequencing and spoligotyping. For this purpose, the protein extraction protocol and the mass spectra reference database were optimized for the identification of 80 clinical isolates of mycobacteria. As a result of this optimization, it was possible to identify and differentiate M. bovis from other members of the Mycobacterium tuberculosis complex with 100% specificity, 90.91% sensitivity and 91.25% reliability. MALDI-TOF MS methodology described herein provides successful identification of M. bovis within bovine/bubaline clinical samples, demonstrating its usefulness for bovine tuberculosis diagnosis in the future. 2019-12-30T18:11:10Z 2019-12-30T18:11:10Z 2019-12-30 2019 2019-12-30T18:11:10Z Artigo de periódico Journal the Veterinary Medical Science, v. 81, n. 10, p.1400?1408, 2019. http://www.alice.cnptia.embrapa.br/alice/handle/doc/1117863 en eng openAccess
institution EMBRAPA
collection DSpace
country Brasil
countrycode BR
component Bibliográfico
access En linea
databasecode dig-alice
tag biblioteca
region America del Sur
libraryname Sistema de bibliotecas de EMBRAPA
language English
eng
topic Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry
Bovine tuberculosis
Mycobacterium bovis BCG
Mycobacterium tuberculosis complex
Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry
Bovine tuberculosis
Mycobacterium bovis BCG
Mycobacterium tuberculosis complex
spellingShingle Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry
Bovine tuberculosis
Mycobacterium bovis BCG
Mycobacterium tuberculosis complex
Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry
Bovine tuberculosis
Mycobacterium bovis BCG
Mycobacterium tuberculosis complex
BACANELLI, G.
OLARTE, L. C.
SILVA, M. R.
RODRIGUES, R. A.
CARNEIRO, P. A. M.
KANEENE, J. B.
PASQUATTI, T. N.
TAKATANI, H.
ZUMÁRRAGA, M. J.
ETGES, R. N.
ARAUJO, F. R.
VERBISCK, N. V.
Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.
description In this study, Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDITOF) mass spectrometry was used to identify Mycobacterium bovis from cattle and buffalo tissue isolates from the North and South regions of Brazil, grown in solid medium and previously identified by Polymerase Chain Reaction (PCR) based on Region of Difference 4 (RD4), sequencing and spoligotyping. For this purpose, the protein extraction protocol and the mass spectra reference database were optimized for the identification of 80 clinical isolates of mycobacteria. As a result of this optimization, it was possible to identify and differentiate M. bovis from other members of the Mycobacterium tuberculosis complex with 100% specificity, 90.91% sensitivity and 91.25% reliability. MALDI-TOF MS methodology described herein provides successful identification of M. bovis within bovine/bubaline clinical samples, demonstrating its usefulness for bovine tuberculosis diagnosis in the future.
author2 GISELE BACANELLI, Universidade Federal de Mato Grosso do Sul - UFMS/Programa de Pós-Graduação em Biotecnologia e Biodiversidade da Região Centro-Oeste
author_facet GISELE BACANELLI, Universidade Federal de Mato Grosso do Sul - UFMS/Programa de Pós-Graduação em Biotecnologia e Biodiversidade da Região Centro-Oeste
BACANELLI, G.
OLARTE, L. C.
SILVA, M. R.
RODRIGUES, R. A.
CARNEIRO, P. A. M.
KANEENE, J. B.
PASQUATTI, T. N.
TAKATANI, H.
ZUMÁRRAGA, M. J.
ETGES, R. N.
ARAUJO, F. R.
VERBISCK, N. V.
format Artigo de periódico
topic_facet Matrix Assisted Laser Desorption Ionization-Time-of-Flight (MALDI-TOF) mass spectrometry
Bovine tuberculosis
Mycobacterium bovis BCG
Mycobacterium tuberculosis complex
author BACANELLI, G.
OLARTE, L. C.
SILVA, M. R.
RODRIGUES, R. A.
CARNEIRO, P. A. M.
KANEENE, J. B.
PASQUATTI, T. N.
TAKATANI, H.
ZUMÁRRAGA, M. J.
ETGES, R. N.
ARAUJO, F. R.
VERBISCK, N. V.
author_sort BACANELLI, G.
title Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.
title_short Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.
title_full Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.
title_fullStr Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.
title_full_unstemmed Matrix Assisted Laser Desorption Ionization-Time-of-Flight mass spectrometry identification of Mycobacterium bovis in Bovinae.
title_sort matrix assisted laser desorption ionization-time-of-flight mass spectrometry identification of mycobacterium bovis in bovinae.
publishDate 2019-12-30
url http://www.alice.cnptia.embrapa.br/alice/handle/doc/1117863
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