The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence

The twin-arginine translocation (Tat) pathway exports fully folded proteins out of the cytoplasm of Gram-negative and Gram-positive bacteria. Although much progress has been made in unraveling the molecular mechanism and biochemical characterization of the Tat system, little is known concerning its functionality and biological role to confer adaptive skills, symbiosis or pathogenesis in the alpha-proteobacteria class. A comparative genomic analysis in the ?-proteobacteria class confirmed the presence of tatA, tatB, and tatC genes in almost all genomes, but significant variations in gene synteny and rearrangements were found in the order Rickettsiales with respect to the typically described operon organization. Transcription of tat genes was confirmed for Anaplasma marginale str. St. Maries and Brucella abortus 2308, two alpha-proteobacteria with full and partial intracellular lifestyles, respectively. The tat genes of A. marginale are scattered throughout the genome, in contrast to the more generalized operon organization. Particularly, tatA showed an approximately 20-fold increase in mRNA levels relative to tatB and tatC. We showed Tat functionality in B. abortus 2308 for the first time, and confirmed conservation of functionality in A. marginale. We present the first experimental description of the Tat system in the Anaplasmataceae and Brucellaceae families. In particular, in A. marginale Tat functionality is conserved despite operon splitting as a consequence of genome rearrangements. Further studies will be required to understand how the proper stoichiometry of the Tat protein complex and its biological role are achieved. In addition, the predicted substrates might be the evidence of role of the Tat translocation system in the transition process from a free-living to a parasitic lifestyle in these alpha-proteobacteria.

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Bibliographic Details
Main Authors: Nuñez, P. A., Soria, M., Farber, M. D.
Format: article biblioteca
Language:eng
Subjects:BACTERIAL PROTEIN, MESSENGER RNA, TAT A PROTEIN, TAT B PROTEIN, TAT C PROTEIN, UNCLASSIFIED DRUG, BACTERIAL RNA, CARRIER PROTEIN, ESCHERICHIA COLI PROTEIN, TWIN ARGININE TRANSLOCASE COMPLEX, E COLI, ANAPLASMA MARGINALE, BACTERIAL GENE, BACTERIAL GENOME, BACTERIAL SECRETION SYSTEM, BRUCELLA ABORTUS, CELL PHENOTYPE, GENE REARRANGEMENT, GENETIC ORGANIZATION, GENETIC TRANSCRIPTION, GENOME ANALYSIS, HETEROLOGOUS EXPRESSION, NONHUMAN, NUCLEOTIDE SEQUENCE, OPERON, PHENOTYPE, PHYLOGENY, PROTEIN EXPRESSION, PROTEIN FUNCTION, SYNTENY, TATA GENE, TATB GENE, TATC GENE, TWIN ARGININE TRANSLOCATION PATHWAY, ALPHAPROTEOBACTERIA, AMINO ACID SEQUENCE, COMPARATIVE STUDY, ESCHERICHIA COLI, GENETIC COMPLEMENTATION, GENETIC VARIABILITY, GENETICS, METABOLISM, MOLECULAR GENETICS, MULTIGENE FAMILY, PROTEIN TRANSPORT, SEQUENCE HOMOLOGY, SPECIES DIFFERENCE, ANAPLASMA MARGINALE STR. ST. MARIES, ANAPLASMATACEAE, BRUCELLA MELITENSIS BIOVAR ABORTUS, BRUCELLACEAE, NEGIBACTERIA, POSIBACTERIA, RICKETTSIALES, GENETIC COMPLEMENTATION TEST, GENETIC VARIATION, GENOME, BACTERIAL, MEMBRANE TRANSPORT PROTEINS, MOLECULAR SEQUENCE DATA, RNA, BACTERIAL, RNA, MESSENGER, SEQUENCE HOMOLOGY, AMINO ACID, SPECIES SPECIFICITY,
Online Access:http://ri.agro.uba.ar/greenstone3/library/collection/arti/document/2012Nunez
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spelling snrd:2012Nunez2021-10-15T16:56:07Z Nuñez, P. A. Soria, M. Farber, M. D. 2012 The twin-arginine translocation (Tat) pathway exports fully folded proteins out of the cytoplasm of Gram-negative and Gram-positive bacteria. Although much progress has been made in unraveling the molecular mechanism and biochemical characterization of the Tat system, little is known concerning its functionality and biological role to confer adaptive skills, symbiosis or pathogenesis in the alpha-proteobacteria class. A comparative genomic analysis in the ?-proteobacteria class confirmed the presence of tatA, tatB, and tatC genes in almost all genomes, but significant variations in gene synteny and rearrangements were found in the order Rickettsiales with respect to the typically described operon organization. Transcription of tat genes was confirmed for Anaplasma marginale str. St. Maries and Brucella abortus 2308, two alpha-proteobacteria with full and partial intracellular lifestyles, respectively. The tat genes of A. marginale are scattered throughout the genome, in contrast to the more generalized operon organization. Particularly, tatA showed an approximately 20-fold increase in mRNA levels relative to tatB and tatC. We showed Tat functionality in B. abortus 2308 for the first time, and confirmed conservation of functionality in A. marginale. We present the first experimental description of the Tat system in the Anaplasmataceae and Brucellaceae families. In particular, in A. marginale Tat functionality is conserved despite operon splitting as a consequence of genome rearrangements. Further studies will be required to understand how the proper stoichiometry of the Tat protein complex and its biological role are achieved. In addition, the predicted substrates might be the evidence of role of the Tat translocation system in the transition process from a free-living to a parasitic lifestyle in these alpha-proteobacteria. application/pdf 10.1371/journal.pone.0033605 1932-6203 http://ri.agro.uba.ar/greenstone3/library/collection/arti/document/2012Nunez eng info:eu-repo/semantics/openAccess openAccess http://ri.agro.uba.ar/greenstone3/library/page/biblioteca#section4 Plos One Vol.7, no.3 e33605 http://www.plos.org/ BACTERIAL PROTEIN MESSENGER RNA TAT A PROTEIN TAT B PROTEIN TAT C PROTEIN UNCLASSIFIED DRUG BACTERIAL RNA CARRIER PROTEIN ESCHERICHIA COLI PROTEIN TWIN ARGININE TRANSLOCASE COMPLEX, E COLI ANAPLASMA MARGINALE BACTERIAL GENE BACTERIAL GENOME BACTERIAL SECRETION SYSTEM BRUCELLA ABORTUS CELL PHENOTYPE GENE REARRANGEMENT GENETIC ORGANIZATION GENETIC TRANSCRIPTION GENOME ANALYSIS HETEROLOGOUS EXPRESSION NONHUMAN NUCLEOTIDE SEQUENCE OPERON PHENOTYPE PHYLOGENY PROTEIN EXPRESSION PROTEIN FUNCTION SYNTENY TATA GENE TATB GENE TATC GENE TWIN ARGININE TRANSLOCATION PATHWAY ALPHAPROTEOBACTERIA AMINO ACID SEQUENCE ANAPLASMA MARGINALE BRUCELLA ABORTUS COMPARATIVE STUDY ESCHERICHIA COLI GENETIC COMPLEMENTATION GENETIC VARIABILITY GENETICS METABOLISM MOLECULAR GENETICS MULTIGENE FAMILY PROTEIN TRANSPORT SEQUENCE HOMOLOGY SPECIES DIFFERENCE ALPHAPROTEOBACTERIA ANAPLASMA MARGINALE STR. ST. MARIES ANAPLASMATACEAE BRUCELLA MELITENSIS BIOVAR ABORTUS BRUCELLACEAE NEGIBACTERIA POSIBACTERIA RICKETTSIALES ALPHAPROTEOBACTERIA AMINO ACID SEQUENCE ANAPLASMA MARGINALE BRUCELLA ABORTUS GENETIC COMPLEMENTATION TEST GENETIC VARIATION GENOME, BACTERIAL MEMBRANE TRANSPORT PROTEINS MOLECULAR SEQUENCE DATA MULTIGENE FAMILY PROTEIN TRANSPORT RNA, BACTERIAL RNA, MESSENGER SEQUENCE HOMOLOGY, AMINO ACID SPECIES SPECIFICITY The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence article info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion publishedVersion
institution UBA
collection DSpace
country Argentina
countrycode AR
component Bibliográfico
access En linea
databasecode dig-ubafa
tag biblioteca
region America del Sur
libraryname Biblioteca Facultad de Agronomía
language eng
topic BACTERIAL PROTEIN
MESSENGER RNA
TAT A PROTEIN
TAT B PROTEIN
TAT C PROTEIN
UNCLASSIFIED DRUG
BACTERIAL RNA
CARRIER PROTEIN
ESCHERICHIA COLI PROTEIN
TWIN ARGININE TRANSLOCASE COMPLEX, E COLI
ANAPLASMA MARGINALE
BACTERIAL GENE
BACTERIAL GENOME
BACTERIAL SECRETION SYSTEM
BRUCELLA ABORTUS
CELL PHENOTYPE
GENE REARRANGEMENT
GENETIC ORGANIZATION
GENETIC TRANSCRIPTION
GENOME ANALYSIS
HETEROLOGOUS EXPRESSION
NONHUMAN
NUCLEOTIDE SEQUENCE
OPERON
PHENOTYPE
PHYLOGENY
PROTEIN EXPRESSION
PROTEIN FUNCTION
SYNTENY
TATA GENE
TATB GENE
TATC GENE
TWIN ARGININE TRANSLOCATION PATHWAY
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
COMPARATIVE STUDY
ESCHERICHIA COLI
GENETIC COMPLEMENTATION
GENETIC VARIABILITY
GENETICS
METABOLISM
MOLECULAR GENETICS
MULTIGENE FAMILY
PROTEIN TRANSPORT
SEQUENCE HOMOLOGY
SPECIES DIFFERENCE
ALPHAPROTEOBACTERIA
ANAPLASMA MARGINALE STR. ST. MARIES
ANAPLASMATACEAE
BRUCELLA MELITENSIS BIOVAR ABORTUS
BRUCELLACEAE
NEGIBACTERIA
POSIBACTERIA
RICKETTSIALES
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
GENETIC COMPLEMENTATION TEST
GENETIC VARIATION
GENOME, BACTERIAL
MEMBRANE TRANSPORT PROTEINS
MOLECULAR SEQUENCE DATA
MULTIGENE FAMILY
PROTEIN TRANSPORT
RNA, BACTERIAL
RNA, MESSENGER
SEQUENCE HOMOLOGY, AMINO ACID
SPECIES SPECIFICITY
BACTERIAL PROTEIN
MESSENGER RNA
TAT A PROTEIN
TAT B PROTEIN
TAT C PROTEIN
UNCLASSIFIED DRUG
BACTERIAL RNA
CARRIER PROTEIN
ESCHERICHIA COLI PROTEIN
TWIN ARGININE TRANSLOCASE COMPLEX, E COLI
ANAPLASMA MARGINALE
BACTERIAL GENE
BACTERIAL GENOME
BACTERIAL SECRETION SYSTEM
BRUCELLA ABORTUS
CELL PHENOTYPE
GENE REARRANGEMENT
GENETIC ORGANIZATION
GENETIC TRANSCRIPTION
GENOME ANALYSIS
HETEROLOGOUS EXPRESSION
NONHUMAN
NUCLEOTIDE SEQUENCE
OPERON
PHENOTYPE
PHYLOGENY
PROTEIN EXPRESSION
PROTEIN FUNCTION
SYNTENY
TATA GENE
TATB GENE
TATC GENE
TWIN ARGININE TRANSLOCATION PATHWAY
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
COMPARATIVE STUDY
ESCHERICHIA COLI
GENETIC COMPLEMENTATION
GENETIC VARIABILITY
GENETICS
METABOLISM
MOLECULAR GENETICS
MULTIGENE FAMILY
PROTEIN TRANSPORT
SEQUENCE HOMOLOGY
SPECIES DIFFERENCE
ALPHAPROTEOBACTERIA
ANAPLASMA MARGINALE STR. ST. MARIES
ANAPLASMATACEAE
BRUCELLA MELITENSIS BIOVAR ABORTUS
BRUCELLACEAE
NEGIBACTERIA
POSIBACTERIA
RICKETTSIALES
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
GENETIC COMPLEMENTATION TEST
GENETIC VARIATION
GENOME, BACTERIAL
MEMBRANE TRANSPORT PROTEINS
MOLECULAR SEQUENCE DATA
MULTIGENE FAMILY
PROTEIN TRANSPORT
RNA, BACTERIAL
RNA, MESSENGER
SEQUENCE HOMOLOGY, AMINO ACID
SPECIES SPECIFICITY
spellingShingle BACTERIAL PROTEIN
MESSENGER RNA
TAT A PROTEIN
TAT B PROTEIN
TAT C PROTEIN
UNCLASSIFIED DRUG
BACTERIAL RNA
CARRIER PROTEIN
ESCHERICHIA COLI PROTEIN
TWIN ARGININE TRANSLOCASE COMPLEX, E COLI
ANAPLASMA MARGINALE
BACTERIAL GENE
BACTERIAL GENOME
BACTERIAL SECRETION SYSTEM
BRUCELLA ABORTUS
CELL PHENOTYPE
GENE REARRANGEMENT
GENETIC ORGANIZATION
GENETIC TRANSCRIPTION
GENOME ANALYSIS
HETEROLOGOUS EXPRESSION
NONHUMAN
NUCLEOTIDE SEQUENCE
OPERON
PHENOTYPE
PHYLOGENY
PROTEIN EXPRESSION
PROTEIN FUNCTION
SYNTENY
TATA GENE
TATB GENE
TATC GENE
TWIN ARGININE TRANSLOCATION PATHWAY
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
COMPARATIVE STUDY
ESCHERICHIA COLI
GENETIC COMPLEMENTATION
GENETIC VARIABILITY
GENETICS
METABOLISM
MOLECULAR GENETICS
MULTIGENE FAMILY
PROTEIN TRANSPORT
SEQUENCE HOMOLOGY
SPECIES DIFFERENCE
ALPHAPROTEOBACTERIA
ANAPLASMA MARGINALE STR. ST. MARIES
ANAPLASMATACEAE
BRUCELLA MELITENSIS BIOVAR ABORTUS
BRUCELLACEAE
NEGIBACTERIA
POSIBACTERIA
RICKETTSIALES
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
GENETIC COMPLEMENTATION TEST
GENETIC VARIATION
GENOME, BACTERIAL
MEMBRANE TRANSPORT PROTEINS
MOLECULAR SEQUENCE DATA
MULTIGENE FAMILY
PROTEIN TRANSPORT
RNA, BACTERIAL
RNA, MESSENGER
SEQUENCE HOMOLOGY, AMINO ACID
SPECIES SPECIFICITY
BACTERIAL PROTEIN
MESSENGER RNA
TAT A PROTEIN
TAT B PROTEIN
TAT C PROTEIN
UNCLASSIFIED DRUG
BACTERIAL RNA
CARRIER PROTEIN
ESCHERICHIA COLI PROTEIN
TWIN ARGININE TRANSLOCASE COMPLEX, E COLI
ANAPLASMA MARGINALE
BACTERIAL GENE
BACTERIAL GENOME
BACTERIAL SECRETION SYSTEM
BRUCELLA ABORTUS
CELL PHENOTYPE
GENE REARRANGEMENT
GENETIC ORGANIZATION
GENETIC TRANSCRIPTION
GENOME ANALYSIS
HETEROLOGOUS EXPRESSION
NONHUMAN
NUCLEOTIDE SEQUENCE
OPERON
PHENOTYPE
PHYLOGENY
PROTEIN EXPRESSION
PROTEIN FUNCTION
SYNTENY
TATA GENE
TATB GENE
TATC GENE
TWIN ARGININE TRANSLOCATION PATHWAY
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
COMPARATIVE STUDY
ESCHERICHIA COLI
GENETIC COMPLEMENTATION
GENETIC VARIABILITY
GENETICS
METABOLISM
MOLECULAR GENETICS
MULTIGENE FAMILY
PROTEIN TRANSPORT
SEQUENCE HOMOLOGY
SPECIES DIFFERENCE
ALPHAPROTEOBACTERIA
ANAPLASMA MARGINALE STR. ST. MARIES
ANAPLASMATACEAE
BRUCELLA MELITENSIS BIOVAR ABORTUS
BRUCELLACEAE
NEGIBACTERIA
POSIBACTERIA
RICKETTSIALES
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
GENETIC COMPLEMENTATION TEST
GENETIC VARIATION
GENOME, BACTERIAL
MEMBRANE TRANSPORT PROTEINS
MOLECULAR SEQUENCE DATA
MULTIGENE FAMILY
PROTEIN TRANSPORT
RNA, BACTERIAL
RNA, MESSENGER
SEQUENCE HOMOLOGY, AMINO ACID
SPECIES SPECIFICITY
Nuñez, P. A.
Soria, M.
Farber, M. D.
The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
description The twin-arginine translocation (Tat) pathway exports fully folded proteins out of the cytoplasm of Gram-negative and Gram-positive bacteria. Although much progress has been made in unraveling the molecular mechanism and biochemical characterization of the Tat system, little is known concerning its functionality and biological role to confer adaptive skills, symbiosis or pathogenesis in the alpha-proteobacteria class. A comparative genomic analysis in the ?-proteobacteria class confirmed the presence of tatA, tatB, and tatC genes in almost all genomes, but significant variations in gene synteny and rearrangements were found in the order Rickettsiales with respect to the typically described operon organization. Transcription of tat genes was confirmed for Anaplasma marginale str. St. Maries and Brucella abortus 2308, two alpha-proteobacteria with full and partial intracellular lifestyles, respectively. The tat genes of A. marginale are scattered throughout the genome, in contrast to the more generalized operon organization. Particularly, tatA showed an approximately 20-fold increase in mRNA levels relative to tatB and tatC. We showed Tat functionality in B. abortus 2308 for the first time, and confirmed conservation of functionality in A. marginale. We present the first experimental description of the Tat system in the Anaplasmataceae and Brucellaceae families. In particular, in A. marginale Tat functionality is conserved despite operon splitting as a consequence of genome rearrangements. Further studies will be required to understand how the proper stoichiometry of the Tat protein complex and its biological role are achieved. In addition, the predicted substrates might be the evidence of role of the Tat translocation system in the transition process from a free-living to a parasitic lifestyle in these alpha-proteobacteria.
format article
topic_facet BACTERIAL PROTEIN
MESSENGER RNA
TAT A PROTEIN
TAT B PROTEIN
TAT C PROTEIN
UNCLASSIFIED DRUG
BACTERIAL RNA
CARRIER PROTEIN
ESCHERICHIA COLI PROTEIN
TWIN ARGININE TRANSLOCASE COMPLEX, E COLI
ANAPLASMA MARGINALE
BACTERIAL GENE
BACTERIAL GENOME
BACTERIAL SECRETION SYSTEM
BRUCELLA ABORTUS
CELL PHENOTYPE
GENE REARRANGEMENT
GENETIC ORGANIZATION
GENETIC TRANSCRIPTION
GENOME ANALYSIS
HETEROLOGOUS EXPRESSION
NONHUMAN
NUCLEOTIDE SEQUENCE
OPERON
PHENOTYPE
PHYLOGENY
PROTEIN EXPRESSION
PROTEIN FUNCTION
SYNTENY
TATA GENE
TATB GENE
TATC GENE
TWIN ARGININE TRANSLOCATION PATHWAY
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
COMPARATIVE STUDY
ESCHERICHIA COLI
GENETIC COMPLEMENTATION
GENETIC VARIABILITY
GENETICS
METABOLISM
MOLECULAR GENETICS
MULTIGENE FAMILY
PROTEIN TRANSPORT
SEQUENCE HOMOLOGY
SPECIES DIFFERENCE
ALPHAPROTEOBACTERIA
ANAPLASMA MARGINALE STR. ST. MARIES
ANAPLASMATACEAE
BRUCELLA MELITENSIS BIOVAR ABORTUS
BRUCELLACEAE
NEGIBACTERIA
POSIBACTERIA
RICKETTSIALES
ALPHAPROTEOBACTERIA
AMINO ACID SEQUENCE
ANAPLASMA MARGINALE
BRUCELLA ABORTUS
GENETIC COMPLEMENTATION TEST
GENETIC VARIATION
GENOME, BACTERIAL
MEMBRANE TRANSPORT PROTEINS
MOLECULAR SEQUENCE DATA
MULTIGENE FAMILY
PROTEIN TRANSPORT
RNA, BACTERIAL
RNA, MESSENGER
SEQUENCE HOMOLOGY, AMINO ACID
SPECIES SPECIFICITY
author Nuñez, P. A.
Soria, M.
Farber, M. D.
author_facet Nuñez, P. A.
Soria, M.
Farber, M. D.
author_sort Nuñez, P. A.
title The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
title_short The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
title_full The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
title_fullStr The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
title_full_unstemmed The twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
title_sort twin-arginine translocation pathway in a-proteobacteria is functionally preserved irrespective of genomic and regulatory divergence
url http://ri.agro.uba.ar/greenstone3/library/collection/arti/document/2012Nunez
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