Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey

Abstract Parvoviruses are ubiquitous pathogens that cause a fatal disease in cats and are able to mutate for cross-species transmission. Both the feline panleukopenia virus (FPV) and the canine parvovirus (CPV), with their antigenic variants, induce a disease in cats that presents with similar signs. The aim of this study was to determine the presence of parvoviruses in blood and exudate samples from five clinically symptomatic cats (from Ankara, Turkey). The gene coding for the VP2 structural capsid protein of the obtained parvoviruses was amplified by polymerase chain reaction (PCR), purified and partially or nearly full-length sequenced. The maximum likelihood (ML) method was used for molecular characterization. Phylogenetic analysis based on nearly full-length sequencing of the VP2 gene and amino acid arrangement showed that four of the viral strains were closely related and localized in the same FPV cluster. The fifth strain found was located in the same cluster but on a separate branch. Viral field strains were included in the CPV-2 group as determined by partial genome analysis: four fitted in the CPV-2c, and one in a separate clade within the CPV-2b group. To our knowledge, this is the first report that details nearly full-length VP2 gene characterisation in Turkish cats. Overall, nearly full-length VP2 contrasts were more effective to determine the origin of parvovirus strains, than partial length comparisons.

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Main Authors: Akkutay-Yoldar,Zeynep, Taylan Koç,B.
Format: Digital revista
Language:English
Published: Universidad Nacional Autónoma de México, Facultad de Medicina Veterinaria y Zootecnia 2019
Online Access:http://www.scielo.org.mx/scielo.php?script=sci_arttext&pid=S2448-67602019000400002
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spelling oai:scielo:S2448-676020190004000022020-04-16Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in TurkeyAkkutay-Yoldar,ZeynepTaylan Koç,B. Canine parvovirus Cat Feline panleukopenia virus PCR Phylogenetic analysis VP2 gene Abstract Parvoviruses are ubiquitous pathogens that cause a fatal disease in cats and are able to mutate for cross-species transmission. Both the feline panleukopenia virus (FPV) and the canine parvovirus (CPV), with their antigenic variants, induce a disease in cats that presents with similar signs. The aim of this study was to determine the presence of parvoviruses in blood and exudate samples from five clinically symptomatic cats (from Ankara, Turkey). The gene coding for the VP2 structural capsid protein of the obtained parvoviruses was amplified by polymerase chain reaction (PCR), purified and partially or nearly full-length sequenced. The maximum likelihood (ML) method was used for molecular characterization. Phylogenetic analysis based on nearly full-length sequencing of the VP2 gene and amino acid arrangement showed that four of the viral strains were closely related and localized in the same FPV cluster. The fifth strain found was located in the same cluster but on a separate branch. Viral field strains were included in the CPV-2 group as determined by partial genome analysis: four fitted in the CPV-2c, and one in a separate clade within the CPV-2b group. To our knowledge, this is the first report that details nearly full-length VP2 gene characterisation in Turkish cats. Overall, nearly full-length VP2 contrasts were more effective to determine the origin of parvovirus strains, than partial length comparisons.info:eu-repo/semantics/openAccessUniversidad Nacional Autónoma de México, Facultad de Medicina Veterinaria y ZootecniaVeterinaria México OA v.6 n.4 20192019-12-01info:eu-repo/semantics/articletext/htmlhttp://www.scielo.org.mx/scielo.php?script=sci_arttext&pid=S2448-67602019000400002en10.22201/fmvz.24486760e.2019.4.643
institution SCIELO
collection OJS
country México
countrycode MX
component Revista
access En linea
databasecode rev-scielo-mx
tag revista
region America del Norte
libraryname SciELO
language English
format Digital
author Akkutay-Yoldar,Zeynep
Taylan Koç,B.
spellingShingle Akkutay-Yoldar,Zeynep
Taylan Koç,B.
Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey
author_facet Akkutay-Yoldar,Zeynep
Taylan Koç,B.
author_sort Akkutay-Yoldar,Zeynep
title Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey
title_short Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey
title_full Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey
title_fullStr Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey
title_full_unstemmed Comparison of partial and full VP2 gene sequences of parvovirus from domestic cats in Turkey
title_sort comparison of partial and full vp2 gene sequences of parvovirus from domestic cats in turkey
description Abstract Parvoviruses are ubiquitous pathogens that cause a fatal disease in cats and are able to mutate for cross-species transmission. Both the feline panleukopenia virus (FPV) and the canine parvovirus (CPV), with their antigenic variants, induce a disease in cats that presents with similar signs. The aim of this study was to determine the presence of parvoviruses in blood and exudate samples from five clinically symptomatic cats (from Ankara, Turkey). The gene coding for the VP2 structural capsid protein of the obtained parvoviruses was amplified by polymerase chain reaction (PCR), purified and partially or nearly full-length sequenced. The maximum likelihood (ML) method was used for molecular characterization. Phylogenetic analysis based on nearly full-length sequencing of the VP2 gene and amino acid arrangement showed that four of the viral strains were closely related and localized in the same FPV cluster. The fifth strain found was located in the same cluster but on a separate branch. Viral field strains were included in the CPV-2 group as determined by partial genome analysis: four fitted in the CPV-2c, and one in a separate clade within the CPV-2b group. To our knowledge, this is the first report that details nearly full-length VP2 gene characterisation in Turkish cats. Overall, nearly full-length VP2 contrasts were more effective to determine the origin of parvovirus strains, than partial length comparisons.
publisher Universidad Nacional Autónoma de México, Facultad de Medicina Veterinaria y Zootecnia
publishDate 2019
url http://www.scielo.org.mx/scielo.php?script=sci_arttext&pid=S2448-67602019000400002
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