Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico

Abstract: The Baird’s tapir (Tapirus bairdii) is the largest terrestrial mammal dwelling in the neotropics and the only native representative of the order Perissodactyla. This species is under a great threat due to the impacts of hunting and habitat loss. Therefore, implementation of conservation strategies, in situ and ex situ, is urgent. However, to improve effectiveness of these strategies knowledge of the species level of genetic variability is needed. We collected samples (hair, feces and blood) from T. bairdii individuals kept in captivity in 4 zoos in Mexico and the field (feces) to extract DNA. We analyzed tapir levels of genetic variability focusing on a 511 bp region of the mtDNA D-loop and a set of 6 microsatellite loci. We found a relatively low allelic richness Rs = 3.94 but a relatively high frequency of private alleles (6 out of 24) and a variability of mother lines higher than reported in other studies (7 haplotypes with 15 polymorphic sites, Hd = 0.846 and Pi = 0.0128). Our results suggest that there might be a relatively high genetic diversity in tapir population inhabiting southern Mexico.

Saved in:
Bibliographic Details
Main Authors: Zavala-Páramo,Alfonso Sinuhé, Oyama,Ken, Mendoza,Eduardo, Zavala-Páramo,María Guadalupe, Pollinger,John, Smith,Thomas B.
Format: Digital revista
Language:English
Published: Instituto de Biología 2017
Online Access:http://www.scielo.org.mx/scielo.php?script=sci_arttext&pid=S1870-34532017000200480
Tags: Add Tag
No Tags, Be the first to tag this record!
id oai:scielo:S1870-34532017000200480
record_format ojs
spelling oai:scielo:S1870-345320170002004802018-04-26Genetic variability in captive individuals of the endangered species Tapirus bairdii in MexicoZavala-Páramo,Alfonso SinuhéOyama,KenMendoza,EduardoZavala-Páramo,María GuadalupePollinger,JohnSmith,Thomas B. Mammal conservation Genetic variability Conservation genetics Perissodactyla Mitochondrial D-loop Abstract: The Baird’s tapir (Tapirus bairdii) is the largest terrestrial mammal dwelling in the neotropics and the only native representative of the order Perissodactyla. This species is under a great threat due to the impacts of hunting and habitat loss. Therefore, implementation of conservation strategies, in situ and ex situ, is urgent. However, to improve effectiveness of these strategies knowledge of the species level of genetic variability is needed. We collected samples (hair, feces and blood) from T. bairdii individuals kept in captivity in 4 zoos in Mexico and the field (feces) to extract DNA. We analyzed tapir levels of genetic variability focusing on a 511 bp region of the mtDNA D-loop and a set of 6 microsatellite loci. We found a relatively low allelic richness Rs = 3.94 but a relatively high frequency of private alleles (6 out of 24) and a variability of mother lines higher than reported in other studies (7 haplotypes with 15 polymorphic sites, Hd = 0.846 and Pi = 0.0128). Our results suggest that there might be a relatively high genetic diversity in tapir population inhabiting southern Mexico.info:eu-repo/semantics/openAccessInstituto de BiologíaRevista mexicana de biodiversidad v.88 n.2 20172017-06-01info:eu-repo/semantics/reporttext/htmlhttp://www.scielo.org.mx/scielo.php?script=sci_arttext&pid=S1870-34532017000200480en10.1016/j.rmb.2017.03.002
institution SCIELO
collection OJS
country México
countrycode MX
component Revista
access En linea
databasecode rev-scielo-mx
tag revista
region America del Norte
libraryname SciELO
language English
format Digital
author Zavala-Páramo,Alfonso Sinuhé
Oyama,Ken
Mendoza,Eduardo
Zavala-Páramo,María Guadalupe
Pollinger,John
Smith,Thomas B.
spellingShingle Zavala-Páramo,Alfonso Sinuhé
Oyama,Ken
Mendoza,Eduardo
Zavala-Páramo,María Guadalupe
Pollinger,John
Smith,Thomas B.
Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico
author_facet Zavala-Páramo,Alfonso Sinuhé
Oyama,Ken
Mendoza,Eduardo
Zavala-Páramo,María Guadalupe
Pollinger,John
Smith,Thomas B.
author_sort Zavala-Páramo,Alfonso Sinuhé
title Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico
title_short Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico
title_full Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico
title_fullStr Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico
title_full_unstemmed Genetic variability in captive individuals of the endangered species Tapirus bairdii in Mexico
title_sort genetic variability in captive individuals of the endangered species tapirus bairdii in mexico
description Abstract: The Baird’s tapir (Tapirus bairdii) is the largest terrestrial mammal dwelling in the neotropics and the only native representative of the order Perissodactyla. This species is under a great threat due to the impacts of hunting and habitat loss. Therefore, implementation of conservation strategies, in situ and ex situ, is urgent. However, to improve effectiveness of these strategies knowledge of the species level of genetic variability is needed. We collected samples (hair, feces and blood) from T. bairdii individuals kept in captivity in 4 zoos in Mexico and the field (feces) to extract DNA. We analyzed tapir levels of genetic variability focusing on a 511 bp region of the mtDNA D-loop and a set of 6 microsatellite loci. We found a relatively low allelic richness Rs = 3.94 but a relatively high frequency of private alleles (6 out of 24) and a variability of mother lines higher than reported in other studies (7 haplotypes with 15 polymorphic sites, Hd = 0.846 and Pi = 0.0128). Our results suggest that there might be a relatively high genetic diversity in tapir population inhabiting southern Mexico.
publisher Instituto de Biología
publishDate 2017
url http://www.scielo.org.mx/scielo.php?script=sci_arttext&pid=S1870-34532017000200480
work_keys_str_mv AT zavalaparamoalfonsosinuhe geneticvariabilityincaptiveindividualsoftheendangeredspeciestapirusbairdiiinmexico
AT oyamaken geneticvariabilityincaptiveindividualsoftheendangeredspeciestapirusbairdiiinmexico
AT mendozaeduardo geneticvariabilityincaptiveindividualsoftheendangeredspeciestapirusbairdiiinmexico
AT zavalaparamomariaguadalupe geneticvariabilityincaptiveindividualsoftheendangeredspeciestapirusbairdiiinmexico
AT pollingerjohn geneticvariabilityincaptiveindividualsoftheendangeredspeciestapirusbairdiiinmexico
AT smiththomasb geneticvariabilityincaptiveindividualsoftheendangeredspeciestapirusbairdiiinmexico
_version_ 1756228733982736384