Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil

ABSTRACT Objective: Nontuberculous mycobacteria (NTM) are a heterogeneous group of bacteria that are widely distributed in nature and associated with opportunistic infections in humans. The aims of this study were to identify NTM in patients with suspected tuberculosis who presented positive cultures and to evaluate the genetic diversity of strains identified as Mycobacterium avium. Methods: We studied pulmonary and extrapulmonary samples obtained from 1,248 patients. The samples that tested positive on culture and negative for the M. tuberculosis complex by molecular identification techniques were evaluated by detection of the hsp65 and rpoB genes and sequencing of conserved fragments of these genes. All strains identified as M. avium were genotyped using the eight-locus mycobacterial interspersed repetitive unit-variable-number tandem-repeat method. Results: We found that NTM accounted for 25 (7.5%) of the 332 mycobacteria isolated. Of those 25, 18 (72%) were M. avium, 5 (20%) were M. abscessus, 1 (4%) was M. gastri, and 1 (4%) was M. kansasii. The 18 M. avium strains showed high diversity, only two strains being genetically related. Conclusions: These results highlight the need to consider the investigation of NTM in patients with suspected active tuberculosis who present with positive cultures, as well as to evaluate the genetic diversity of M. avium strains.

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Main Authors: Busatto,Caroline, Vianna,Júlia Silveira, Silva,Ana Barbara Scholante, Basso,Rossana, Silveira,Jussara, Groll,Andrea Von, Ramis,Ivy Bastos, Silva,Pedro Eduardo Almeida da
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Pneumologia e Tisiologia 2020
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-37132020000200207
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spelling oai:scielo:S1806-371320200002002072020-05-06Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of BrazilBusatto,CarolineVianna,Júlia SilveiraSilva,Ana Barbara ScholanteBasso,RossanaSilveira,JussaraGroll,Andrea VonRamis,Ivy BastosSilva,Pedro Eduardo Almeida da Mycobacterium avium Nontuberculous mycobacteria HIV Genotyping techniques ABSTRACT Objective: Nontuberculous mycobacteria (NTM) are a heterogeneous group of bacteria that are widely distributed in nature and associated with opportunistic infections in humans. The aims of this study were to identify NTM in patients with suspected tuberculosis who presented positive cultures and to evaluate the genetic diversity of strains identified as Mycobacterium avium. Methods: We studied pulmonary and extrapulmonary samples obtained from 1,248 patients. The samples that tested positive on culture and negative for the M. tuberculosis complex by molecular identification techniques were evaluated by detection of the hsp65 and rpoB genes and sequencing of conserved fragments of these genes. All strains identified as M. avium were genotyped using the eight-locus mycobacterial interspersed repetitive unit-variable-number tandem-repeat method. Results: We found that NTM accounted for 25 (7.5%) of the 332 mycobacteria isolated. Of those 25, 18 (72%) were M. avium, 5 (20%) were M. abscessus, 1 (4%) was M. gastri, and 1 (4%) was M. kansasii. The 18 M. avium strains showed high diversity, only two strains being genetically related. Conclusions: These results highlight the need to consider the investigation of NTM in patients with suspected active tuberculosis who present with positive cultures, as well as to evaluate the genetic diversity of M. avium strains.info:eu-repo/semantics/openAccessSociedade Brasileira de Pneumologia e TisiologiaJornal Brasileiro de Pneumologia v.46 n.2 20202020-01-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-37132020000200207en10.36416/1806-3756/e20190184
institution SCIELO
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country Brasil
countrycode BR
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region America del Sur
libraryname SciELO
language English
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author Busatto,Caroline
Vianna,Júlia Silveira
Silva,Ana Barbara Scholante
Basso,Rossana
Silveira,Jussara
Groll,Andrea Von
Ramis,Ivy Bastos
Silva,Pedro Eduardo Almeida da
spellingShingle Busatto,Caroline
Vianna,Júlia Silveira
Silva,Ana Barbara Scholante
Basso,Rossana
Silveira,Jussara
Groll,Andrea Von
Ramis,Ivy Bastos
Silva,Pedro Eduardo Almeida da
Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil
author_facet Busatto,Caroline
Vianna,Júlia Silveira
Silva,Ana Barbara Scholante
Basso,Rossana
Silveira,Jussara
Groll,Andrea Von
Ramis,Ivy Bastos
Silva,Pedro Eduardo Almeida da
author_sort Busatto,Caroline
title Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil
title_short Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil
title_full Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil
title_fullStr Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil
title_full_unstemmed Nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of Mycobacterium avium in the extreme south of Brazil
title_sort nontuberculous mycobacteria in patients with suspected tuberculosis and the genetic diversity of mycobacterium avium in the extreme south of brazil
description ABSTRACT Objective: Nontuberculous mycobacteria (NTM) are a heterogeneous group of bacteria that are widely distributed in nature and associated with opportunistic infections in humans. The aims of this study were to identify NTM in patients with suspected tuberculosis who presented positive cultures and to evaluate the genetic diversity of strains identified as Mycobacterium avium. Methods: We studied pulmonary and extrapulmonary samples obtained from 1,248 patients. The samples that tested positive on culture and negative for the M. tuberculosis complex by molecular identification techniques were evaluated by detection of the hsp65 and rpoB genes and sequencing of conserved fragments of these genes. All strains identified as M. avium were genotyped using the eight-locus mycobacterial interspersed repetitive unit-variable-number tandem-repeat method. Results: We found that NTM accounted for 25 (7.5%) of the 332 mycobacteria isolated. Of those 25, 18 (72%) were M. avium, 5 (20%) were M. abscessus, 1 (4%) was M. gastri, and 1 (4%) was M. kansasii. The 18 M. avium strains showed high diversity, only two strains being genetically related. Conclusions: These results highlight the need to consider the investigation of NTM in patients with suspected active tuberculosis who present with positive cultures, as well as to evaluate the genetic diversity of M. avium strains.
publisher Sociedade Brasileira de Pneumologia e Tisiologia
publishDate 2020
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1806-37132020000200207
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