Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group

The Lactobacillus acidophilus group is a phylogenetically distinct group of closely related lactobacilli. Members of this group are considered to have probiotic properties and occupy different environmental niches. Bacteria generally sense and respond to environmental changes through two component systems (TCSs) which consist of a histidine protein kinase (HPK) and its cognate response regulator (RR). With the use of in silico techniques, the five completely sequenced L. acidophilus group genomes were scanned in order to predict TCSs. Five to nine putative TCSs encoding genes were detected in individual genomes of the L. acidophilus group. The L. acidophilus group HPKs and RRs were classified into subfamilies using the Grebe and Stock classification method. Putative TCSs were analyzed with respect to conserved domains to predict biological functions. Putative biological functions were predicted for the L. acidophilus group HPKs and RRs by comparing them with those of other microorganisms. Some of TCSs were putatively involved in a wide variety of functions which are related with probiotic ability, including tolerance to acid and bile, production of antimicrobial peptides, resistibility to the glycopeptide antibiotic vancomycin, and oxidative condition.

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Main Authors: Cui,Yanhua, Qu,Xiaojun
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Microbiologia 2011
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100019
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spelling oai:scielo:S1517-838220110001000192011-01-10Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus groupCui,YanhuaQu,Xiaojun Lactobacillus acidophilus group two component system histidine protein kinase response regulator protein bioinformatics analysis The Lactobacillus acidophilus group is a phylogenetically distinct group of closely related lactobacilli. Members of this group are considered to have probiotic properties and occupy different environmental niches. Bacteria generally sense and respond to environmental changes through two component systems (TCSs) which consist of a histidine protein kinase (HPK) and its cognate response regulator (RR). With the use of in silico techniques, the five completely sequenced L. acidophilus group genomes were scanned in order to predict TCSs. Five to nine putative TCSs encoding genes were detected in individual genomes of the L. acidophilus group. The L. acidophilus group HPKs and RRs were classified into subfamilies using the Grebe and Stock classification method. Putative TCSs were analyzed with respect to conserved domains to predict biological functions. Putative biological functions were predicted for the L. acidophilus group HPKs and RRs by comparing them with those of other microorganisms. Some of TCSs were putatively involved in a wide variety of functions which are related with probiotic ability, including tolerance to acid and bile, production of antimicrobial peptides, resistibility to the glycopeptide antibiotic vancomycin, and oxidative condition.info:eu-repo/semantics/openAccessSociedade Brasileira de MicrobiologiaBrazilian Journal of Microbiology v.42 n.1 20112011-03-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100019en10.1590/S1517-83822011000100019
institution SCIELO
collection OJS
country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
tag revista
region America del Sur
libraryname SciELO
language English
format Digital
author Cui,Yanhua
Qu,Xiaojun
spellingShingle Cui,Yanhua
Qu,Xiaojun
Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group
author_facet Cui,Yanhua
Qu,Xiaojun
author_sort Cui,Yanhua
title Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group
title_short Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group
title_full Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group
title_fullStr Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group
title_full_unstemmed Comparative analysis of two component signal transduction systems of the Lactobacillus acidophilus group
title_sort comparative analysis of two component signal transduction systems of the lactobacillus acidophilus group
description The Lactobacillus acidophilus group is a phylogenetically distinct group of closely related lactobacilli. Members of this group are considered to have probiotic properties and occupy different environmental niches. Bacteria generally sense and respond to environmental changes through two component systems (TCSs) which consist of a histidine protein kinase (HPK) and its cognate response regulator (RR). With the use of in silico techniques, the five completely sequenced L. acidophilus group genomes were scanned in order to predict TCSs. Five to nine putative TCSs encoding genes were detected in individual genomes of the L. acidophilus group. The L. acidophilus group HPKs and RRs were classified into subfamilies using the Grebe and Stock classification method. Putative TCSs were analyzed with respect to conserved domains to predict biological functions. Putative biological functions were predicted for the L. acidophilus group HPKs and RRs by comparing them with those of other microorganisms. Some of TCSs were putatively involved in a wide variety of functions which are related with probiotic ability, including tolerance to acid and bile, production of antimicrobial peptides, resistibility to the glycopeptide antibiotic vancomycin, and oxidative condition.
publisher Sociedade Brasileira de Microbiologia
publishDate 2011
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822011000100019
work_keys_str_mv AT cuiyanhua comparativeanalysisoftwocomponentsignaltransductionsystemsofthelactobacillusacidophilusgroup
AT quxiaojun comparativeanalysisoftwocomponentsignaltransductionsystemsofthelactobacillusacidophilusgroup
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