Genetic structure and a selected core set of brazilian soybean cultivars

Soybean is one of the most valuable and profitable oil crop species and a thorough knowledge of the genetic structure of this crop is necessary for developing the best breeding strategies. In this study, a representative collection of soybean cultivars recommended for farming in all Brazilian regions was genotyped using 27 simple sequence repeat (SSR) loci. A total of 130 alleles were detected, with an average allelic number of 4.81 per locus. These alleles determined the core set that best represented this soybean germplasm. The Bayesian analysis revealed the presence of two clusters or subgroups within the whole collection (435 soybean cultivars) and the core set (31 entries). Cultivars of similar origin (ancestral) were clustered into the same groups in both analyses. The genetic diversity parameters, based on the SSR loci, revealed high similarity between the whole collection and core set. Differences between the two clusters detected in the core set were attributed more to the frequency of their ancestors than to their genetic base. In terms of ancestry, divergent groups were presented and a panel is shown which may foster efficient breeding programs and aid soybean breeders in planning reliable crossings in the development of new varieties.

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Main Authors: Priolli,Regina Helena Geribello, Wysmierski,Philip Traldi, Cunha,Camila Pinto da, Pinheiro,José Baldin, Vello,Natal Antonio
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Genética 2013
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572013000300013
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spelling oai:scielo:S1415-475720130003000132013-08-23Genetic structure and a selected core set of brazilian soybean cultivarsPriolli,Regina Helena GeribelloWysmierski,Philip TraldiCunha,Camila Pinto daPinheiro,José BaldinVello,Natal Antonio core collection genetic base Glycine max (L.) Merrill Bayesian method SSR markers Soybean is one of the most valuable and profitable oil crop species and a thorough knowledge of the genetic structure of this crop is necessary for developing the best breeding strategies. In this study, a representative collection of soybean cultivars recommended for farming in all Brazilian regions was genotyped using 27 simple sequence repeat (SSR) loci. A total of 130 alleles were detected, with an average allelic number of 4.81 per locus. These alleles determined the core set that best represented this soybean germplasm. The Bayesian analysis revealed the presence of two clusters or subgroups within the whole collection (435 soybean cultivars) and the core set (31 entries). Cultivars of similar origin (ancestral) were clustered into the same groups in both analyses. The genetic diversity parameters, based on the SSR loci, revealed high similarity between the whole collection and core set. Differences between the two clusters detected in the core set were attributed more to the frequency of their ancestors than to their genetic base. In terms of ancestry, divergent groups were presented and a panel is shown which may foster efficient breeding programs and aid soybean breeders in planning reliable crossings in the development of new varieties.info:eu-repo/semantics/openAccessSociedade Brasileira de GenéticaGenetics and Molecular Biology v.36 n.3 20132013-01-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572013000300013en10.1590/S1415-47572013005000034
institution SCIELO
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country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
tag revista
region America del Sur
libraryname SciELO
language English
format Digital
author Priolli,Regina Helena Geribello
Wysmierski,Philip Traldi
Cunha,Camila Pinto da
Pinheiro,José Baldin
Vello,Natal Antonio
spellingShingle Priolli,Regina Helena Geribello
Wysmierski,Philip Traldi
Cunha,Camila Pinto da
Pinheiro,José Baldin
Vello,Natal Antonio
Genetic structure and a selected core set of brazilian soybean cultivars
author_facet Priolli,Regina Helena Geribello
Wysmierski,Philip Traldi
Cunha,Camila Pinto da
Pinheiro,José Baldin
Vello,Natal Antonio
author_sort Priolli,Regina Helena Geribello
title Genetic structure and a selected core set of brazilian soybean cultivars
title_short Genetic structure and a selected core set of brazilian soybean cultivars
title_full Genetic structure and a selected core set of brazilian soybean cultivars
title_fullStr Genetic structure and a selected core set of brazilian soybean cultivars
title_full_unstemmed Genetic structure and a selected core set of brazilian soybean cultivars
title_sort genetic structure and a selected core set of brazilian soybean cultivars
description Soybean is one of the most valuable and profitable oil crop species and a thorough knowledge of the genetic structure of this crop is necessary for developing the best breeding strategies. In this study, a representative collection of soybean cultivars recommended for farming in all Brazilian regions was genotyped using 27 simple sequence repeat (SSR) loci. A total of 130 alleles were detected, with an average allelic number of 4.81 per locus. These alleles determined the core set that best represented this soybean germplasm. The Bayesian analysis revealed the presence of two clusters or subgroups within the whole collection (435 soybean cultivars) and the core set (31 entries). Cultivars of similar origin (ancestral) were clustered into the same groups in both analyses. The genetic diversity parameters, based on the SSR loci, revealed high similarity between the whole collection and core set. Differences between the two clusters detected in the core set were attributed more to the frequency of their ancestors than to their genetic base. In terms of ancestry, divergent groups were presented and a panel is shown which may foster efficient breeding programs and aid soybean breeders in planning reliable crossings in the development of new varieties.
publisher Sociedade Brasileira de Genética
publishDate 2013
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572013000300013
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