Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina

Bombyx mori and Bombyx mandarina are morphologically and physiologically similar. In this study, we compared the nucleotide variations in the complete mitochondrial (mt) genomes between the domesticated silkmoth, B. mori, and its wild ancestors, Chinese B. mandarina (ChBm) and Japanese B. mandarina (JaBm). The sequence divergence and transition mutation ratio between B. mori and ChBm are significantly smaller than those observed between B. mori and JaBm. The preference of transition by DNA strands between B. mori and ChBm is consistent with that between B. mori and JaBm, however, the regional variation in nucleotide substitution rate shows a different feature. These results suggest that the ChBm mt genome is not undergoing the same evolutionary process as JaBm, providing evidence for selection on mtDNA. Moreover, investigation of the nucleotide sequence divergence in the A+T-rich region of Bombyx mt genomes also provides evidence for the assumption that the A+T-rich region might not be the fastest evolving region of the mtDNA of insects.

Saved in:
Bibliographic Details
Main Authors: Li,Yu-Ping, Song,Wu, Shi,Sheng-Lin, Liu,Yan-Qun, Pan,Min-Hui, Dai,Fang-Yin, Lu,Cheng, Xiang,Zhong-Huai
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Genética 2010
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000100031
Tags: Add Tag
No Tags, Be the first to tag this record!
id oai:scielo:S1415-47572010000100031
record_format ojs
spelling oai:scielo:S1415-475720100001000312010-02-12Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarinaLi,Yu-PingSong,WuShi,Sheng-LinLiu,Yan-QunPan,Min-HuiDai,Fang-YinLu,ChengXiang,Zhong-Huai nucleotide substitution pattern mitochondrial genome Bombyx mori Chinese Bombyx mandarina Japanese Bombyx mandarina Bombyx mori and Bombyx mandarina are morphologically and physiologically similar. In this study, we compared the nucleotide variations in the complete mitochondrial (mt) genomes between the domesticated silkmoth, B. mori, and its wild ancestors, Chinese B. mandarina (ChBm) and Japanese B. mandarina (JaBm). The sequence divergence and transition mutation ratio between B. mori and ChBm are significantly smaller than those observed between B. mori and JaBm. The preference of transition by DNA strands between B. mori and ChBm is consistent with that between B. mori and JaBm, however, the regional variation in nucleotide substitution rate shows a different feature. These results suggest that the ChBm mt genome is not undergoing the same evolutionary process as JaBm, providing evidence for selection on mtDNA. Moreover, investigation of the nucleotide sequence divergence in the A+T-rich region of Bombyx mt genomes also provides evidence for the assumption that the A+T-rich region might not be the fastest evolving region of the mtDNA of insects.info:eu-repo/semantics/openAccessSociedade Brasileira de GenéticaGenetics and Molecular Biology v.33 n.1 20102010-01-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000100031en10.1590/S1415-47572009005000108
institution SCIELO
collection OJS
country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
tag revista
region America del Sur
libraryname SciELO
language English
format Digital
author Li,Yu-Ping
Song,Wu
Shi,Sheng-Lin
Liu,Yan-Qun
Pan,Min-Hui
Dai,Fang-Yin
Lu,Cheng
Xiang,Zhong-Huai
spellingShingle Li,Yu-Ping
Song,Wu
Shi,Sheng-Lin
Liu,Yan-Qun
Pan,Min-Hui
Dai,Fang-Yin
Lu,Cheng
Xiang,Zhong-Huai
Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina
author_facet Li,Yu-Ping
Song,Wu
Shi,Sheng-Lin
Liu,Yan-Qun
Pan,Min-Hui
Dai,Fang-Yin
Lu,Cheng
Xiang,Zhong-Huai
author_sort Li,Yu-Ping
title Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina
title_short Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina
title_full Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina
title_fullStr Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina
title_full_unstemmed Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina
title_sort mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, bombyx mori, and its wild ancestors, chinese bombyx mandarina and japanese bombyx mandarina
description Bombyx mori and Bombyx mandarina are morphologically and physiologically similar. In this study, we compared the nucleotide variations in the complete mitochondrial (mt) genomes between the domesticated silkmoth, B. mori, and its wild ancestors, Chinese B. mandarina (ChBm) and Japanese B. mandarina (JaBm). The sequence divergence and transition mutation ratio between B. mori and ChBm are significantly smaller than those observed between B. mori and JaBm. The preference of transition by DNA strands between B. mori and ChBm is consistent with that between B. mori and JaBm, however, the regional variation in nucleotide substitution rate shows a different feature. These results suggest that the ChBm mt genome is not undergoing the same evolutionary process as JaBm, providing evidence for selection on mtDNA. Moreover, investigation of the nucleotide sequence divergence in the A+T-rich region of Bombyx mt genomes also provides evidence for the assumption that the A+T-rich region might not be the fastest evolving region of the mtDNA of insects.
publisher Sociedade Brasileira de Genética
publishDate 2010
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572010000100031
work_keys_str_mv AT liyuping mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT songwu mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT shishenglin mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT liuyanqun mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT panminhui mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT daifangyin mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT lucheng mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
AT xiangzhonghuai mitochondrialgenomenucleotidesubstitutionpatternbetweendomesticatedsilkmothbombyxmorianditswildancestorschinesebombyxmandarinaandjapanesebombyxmandarina
_version_ 1756419081840361472