Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers

The ''cagaita tree'' (Eugenia dysenterica) is a plant found widespread in the Brazilian Cerrado. Its fruit is used for popular consumption and for industrial purposes. This study opens a new perspective for the generation of population genetic data and parameters estimates for devising sound collection and conservation procedures for Eugenia dysenterica. A battery of 356 primer pairs developed for Eucalyptus spp. was tested on the ''cagaita tree''. Only 10 primer pairs were found to be transferable between the two species. Using a polyacrilamide gel, an average of 10.4 alleles per locus was detected, in a sample of 116 individuals from 10 natural ''cagaita tree'' populations. Seven polymorphic loci allowed estimation of genetic parameters, including expected average heterozygosity He = 0,442, among population diversity, R ST = 0,268 and gene flow Nm = 0,680. Results indicated a potential of SSR locus transferability developed for Eucalyptus to other species of different genera, such as in the case of the ''cagaita tree''. The high genetic diversity among populations detected with SSR markers indicated that these markers are highly sensitive to detect population structure. Estimated Nm values and the existence of private alleles indicated reduced gene flow and consequently possible damage to the metapopulation structure.

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Main Authors: Zucchi,Maria Imaculada, Brondani,Rosana Pereira Vianello, Pinheiro,José Baldin, Chaves,Lázaro José, Coelho,Alexandre Siqueira Guedes, Vencovsky,Roland
Format: Digital revista
Language:English
Published: Sociedade Brasileira de Genética 2003
Online Access:http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000400008
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spelling oai:scielo:S1415-475720030004000082004-04-06Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markersZucchi,Maria ImaculadaBrondani,Rosana Pereira VianelloPinheiro,José BaldinChaves,Lázaro JoséCoelho,Alexandre Siqueira GuedesVencovsky,Roland SSR Myrtaceae Cerrado tropical tree genetic diversity and transferability The ''cagaita tree'' (Eugenia dysenterica) is a plant found widespread in the Brazilian Cerrado. Its fruit is used for popular consumption and for industrial purposes. This study opens a new perspective for the generation of population genetic data and parameters estimates for devising sound collection and conservation procedures for Eugenia dysenterica. A battery of 356 primer pairs developed for Eucalyptus spp. was tested on the ''cagaita tree''. Only 10 primer pairs were found to be transferable between the two species. Using a polyacrilamide gel, an average of 10.4 alleles per locus was detected, in a sample of 116 individuals from 10 natural ''cagaita tree'' populations. Seven polymorphic loci allowed estimation of genetic parameters, including expected average heterozygosity He = 0,442, among population diversity, R ST = 0,268 and gene flow Nm = 0,680. Results indicated a potential of SSR locus transferability developed for Eucalyptus to other species of different genera, such as in the case of the ''cagaita tree''. The high genetic diversity among populations detected with SSR markers indicated that these markers are highly sensitive to detect population structure. Estimated Nm values and the existence of private alleles indicated reduced gene flow and consequently possible damage to the metapopulation structure.info:eu-repo/semantics/openAccessSociedade Brasileira de GenéticaGenetics and Molecular Biology v.26 n.4 20032003-12-01info:eu-repo/semantics/articletext/htmlhttp://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000400008en10.1590/S1415-47572003000400008
institution SCIELO
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country Brasil
countrycode BR
component Revista
access En linea
databasecode rev-scielo-br
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region America del Sur
libraryname SciELO
language English
format Digital
author Zucchi,Maria Imaculada
Brondani,Rosana Pereira Vianello
Pinheiro,José Baldin
Chaves,Lázaro José
Coelho,Alexandre Siqueira Guedes
Vencovsky,Roland
spellingShingle Zucchi,Maria Imaculada
Brondani,Rosana Pereira Vianello
Pinheiro,José Baldin
Chaves,Lázaro José
Coelho,Alexandre Siqueira Guedes
Vencovsky,Roland
Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers
author_facet Zucchi,Maria Imaculada
Brondani,Rosana Pereira Vianello
Pinheiro,José Baldin
Chaves,Lázaro José
Coelho,Alexandre Siqueira Guedes
Vencovsky,Roland
author_sort Zucchi,Maria Imaculada
title Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers
title_short Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers
title_full Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers
title_fullStr Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers
title_full_unstemmed Genetic structure and gene flow in Eugenia dysenterica DC in the Brazilian Cerrado utilizing SSR markers
title_sort genetic structure and gene flow in eugenia dysenterica dc in the brazilian cerrado utilizing ssr markers
description The ''cagaita tree'' (Eugenia dysenterica) is a plant found widespread in the Brazilian Cerrado. Its fruit is used for popular consumption and for industrial purposes. This study opens a new perspective for the generation of population genetic data and parameters estimates for devising sound collection and conservation procedures for Eugenia dysenterica. A battery of 356 primer pairs developed for Eucalyptus spp. was tested on the ''cagaita tree''. Only 10 primer pairs were found to be transferable between the two species. Using a polyacrilamide gel, an average of 10.4 alleles per locus was detected, in a sample of 116 individuals from 10 natural ''cagaita tree'' populations. Seven polymorphic loci allowed estimation of genetic parameters, including expected average heterozygosity He = 0,442, among population diversity, R ST = 0,268 and gene flow Nm = 0,680. Results indicated a potential of SSR locus transferability developed for Eucalyptus to other species of different genera, such as in the case of the ''cagaita tree''. The high genetic diversity among populations detected with SSR markers indicated that these markers are highly sensitive to detect population structure. Estimated Nm values and the existence of private alleles indicated reduced gene flow and consequently possible damage to the metapopulation structure.
publisher Sociedade Brasileira de Genética
publishDate 2003
url http://old.scielo.br/scielo.php?script=sci_arttext&pid=S1415-47572003000400008
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