Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile

Genetic diversity studies in domestic animals allow evaluating genetic variation within and among breeds mainly for conservation purposes. In Chile exist isolated recovery programs, conservation and characterization of animal genetic resources, a consequence of which the vast majority of them have not been characterized, poorly used, and some of them have become extinct. The aim of this research was to determine genetic diversity and relationship between ’Araucana’ creole and ’Hampshire Down’ sheeps based on microsatellite markers; sheep breeds with similar phenotypic characteristics, raised in the south of Chile. A total of 64 ’Araucana’ sheep (’Araucana’ from Freire, AF: 27, ’Araucana’ from Padre Las Casas, AP: 10, ’Araucana’ from Chol Chol, AC: 15, ’Araucana’ from Villarrica, AV: 12) and 43 ’Hampshire Down’ sheep (’Hampshire’ from Marchigue, HM: 18, ’Hampshire’ from Valdivia, HV: 11, ’Hampshire’ from San José, HS: 14) were analyzed using 17 microsatellite markers for determine the genetic diversity and relationship between breeds. A total of 284 alleles were observed with average polymorphic information content equal to 0.76, showing that the microsatellites panel used was highly informative. Estimated heterozygosity ranged from 0.73 in ’Hampshire Down’ to 0.85 in ’Araucana’. The low inbreeding or endogamy coefficient (F IS, 0.022) and total inbreeding estimate (F IT, 0.070) indicated low level of inbreeding within and among breeds. The phylogenetic tree showed a separation between HS and HV, and the other sheep populations. The results indicated high genetic variability, low inbreeding, and low genetic differentiation, except for HV and HS, and were in according with geographical location and breeding practices.

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Main Authors: Bravo,Silvana, Larama,Giovanni, Ortíz,Manuel, Sepúlveda,Néstor
Format: Digital revista
Language:English
Published: Instituto de Investigaciones Agropecuarias, INIA 2015
Online Access:http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0718-58392015000100018
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spelling oai:scielo:S0718-583920150001000182018-10-01Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in ChileBravo,SilvanaLarama,GiovanniOrtíz,ManuelSepúlveda,Néstor Breed assignment creole sheep genetic variability microsatellites Genetic diversity studies in domestic animals allow evaluating genetic variation within and among breeds mainly for conservation purposes. In Chile exist isolated recovery programs, conservation and characterization of animal genetic resources, a consequence of which the vast majority of them have not been characterized, poorly used, and some of them have become extinct. The aim of this research was to determine genetic diversity and relationship between ’Araucana’ creole and ’Hampshire Down’ sheeps based on microsatellite markers; sheep breeds with similar phenotypic characteristics, raised in the south of Chile. A total of 64 ’Araucana’ sheep (’Araucana’ from Freire, AF: 27, ’Araucana’ from Padre Las Casas, AP: 10, ’Araucana’ from Chol Chol, AC: 15, ’Araucana’ from Villarrica, AV: 12) and 43 ’Hampshire Down’ sheep (’Hampshire’ from Marchigue, HM: 18, ’Hampshire’ from Valdivia, HV: 11, ’Hampshire’ from San José, HS: 14) were analyzed using 17 microsatellite markers for determine the genetic diversity and relationship between breeds. A total of 284 alleles were observed with average polymorphic information content equal to 0.76, showing that the microsatellites panel used was highly informative. Estimated heterozygosity ranged from 0.73 in ’Hampshire Down’ to 0.85 in ’Araucana’. The low inbreeding or endogamy coefficient (F IS, 0.022) and total inbreeding estimate (F IT, 0.070) indicated low level of inbreeding within and among breeds. The phylogenetic tree showed a separation between HS and HV, and the other sheep populations. The results indicated high genetic variability, low inbreeding, and low genetic differentiation, except for HV and HS, and were in according with geographical location and breeding practices.info:eu-repo/semantics/openAccessInstituto de Investigaciones Agropecuarias, INIAChilean journal of agricultural research v.75 n.1 20152015-03-01text/htmlhttp://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0718-58392015000100018en10.4067/S0718-58392015000100018
institution SCIELO
collection OJS
country Chile
countrycode CL
component Revista
access En linea
databasecode rev-scielo-cl
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region America del Sur
libraryname SciELO
language English
format Digital
author Bravo,Silvana
Larama,Giovanni
Ortíz,Manuel
Sepúlveda,Néstor
spellingShingle Bravo,Silvana
Larama,Giovanni
Ortíz,Manuel
Sepúlveda,Néstor
Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile
author_facet Bravo,Silvana
Larama,Giovanni
Ortíz,Manuel
Sepúlveda,Néstor
author_sort Bravo,Silvana
title Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile
title_short Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile
title_full Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile
title_fullStr Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile
title_full_unstemmed Genetic differentiation between ’Araucana’ creole and ’Hampshire Down’ sheeps in Chile
title_sort genetic differentiation between ’araucana’ creole and ’hampshire down’ sheeps in chile
description Genetic diversity studies in domestic animals allow evaluating genetic variation within and among breeds mainly for conservation purposes. In Chile exist isolated recovery programs, conservation and characterization of animal genetic resources, a consequence of which the vast majority of them have not been characterized, poorly used, and some of them have become extinct. The aim of this research was to determine genetic diversity and relationship between ’Araucana’ creole and ’Hampshire Down’ sheeps based on microsatellite markers; sheep breeds with similar phenotypic characteristics, raised in the south of Chile. A total of 64 ’Araucana’ sheep (’Araucana’ from Freire, AF: 27, ’Araucana’ from Padre Las Casas, AP: 10, ’Araucana’ from Chol Chol, AC: 15, ’Araucana’ from Villarrica, AV: 12) and 43 ’Hampshire Down’ sheep (’Hampshire’ from Marchigue, HM: 18, ’Hampshire’ from Valdivia, HV: 11, ’Hampshire’ from San José, HS: 14) were analyzed using 17 microsatellite markers for determine the genetic diversity and relationship between breeds. A total of 284 alleles were observed with average polymorphic information content equal to 0.76, showing that the microsatellites panel used was highly informative. Estimated heterozygosity ranged from 0.73 in ’Hampshire Down’ to 0.85 in ’Araucana’. The low inbreeding or endogamy coefficient (F IS, 0.022) and total inbreeding estimate (F IT, 0.070) indicated low level of inbreeding within and among breeds. The phylogenetic tree showed a separation between HS and HV, and the other sheep populations. The results indicated high genetic variability, low inbreeding, and low genetic differentiation, except for HV and HS, and were in according with geographical location and breeding practices.
publisher Instituto de Investigaciones Agropecuarias, INIA
publishDate 2015
url http://www.scielo.cl/scielo.php?script=sci_arttext&pid=S0718-58392015000100018
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