The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa

BACKGROUND. On 26 March 2020, the South African (SA) government initiated a 21 -day national level 5 lockdown which was subsequently eased off and downgraded to level 4 on 1 May and to level 3 on 1 June. The effect of lockdown measures on SARS-CoV-2 infectivity is currently uncertain. In this article, we analyse the effects of the lockdown measures on the SARS-CoV-2 epidemic in one of the epicentres in SA.OBJECTIVES. To measure the effects of lockdown measures introduced in SA on SARS-CoV-2 attack rates (ARs, the percentage of individuals who tested positive in a specified time period) in Gauteng Province during a 4-month period (March - June 2020).METHODS. In this retrospective cohort study, we used a comprehensive database from an independent pathology laboratory in Gauteng. We analysed trends of positivity rates of reverse transcription polymerase chain reaction tests done during the 4-month period. The ARs are reported over time (unweighted and age-weighted 14-day moving averages) by age groups, gender, and different regions/districts in Gauteng.RESULTS. A total of 162 528 tests were performed at a private laboratory between 5 March and 30 June 2020, of which 20 574 were positive (overall AR 12.7%). These positive tests constituted 44.8% of all positive cases in the province (20 574/45 944). Sixty-two percent of all tests were done in June during lockdown level 3. There was an exponential increase in the AR in June (18.3%) when lockdown was eased to level 3, in comparison with 4.2% (March), 2.2% (April) and 3.3% (May). The increase in June was seen in all the age groups, although it was more pronounced in the 21-60 years age groups than the younger (0 - 20 years) and older (&gt;60 years) age groups. The AR was significantly higher in males (13.2%) compared with females (12.1%) (x2test, p<0.0001).CONCLUSIONS. The findings of this study testify to the rapid increase in ARs resulting from easing of the lockdown regulations, especially to level 3 in June. Of concern is the upward trend in the AR across all age groups, especially <20 years ( 15.9%), which was not reported in other parts of the world. Population age dynamics should therefore be considered when taking future decisions about lockdown regulations.

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Main Authors: Pillai,J, Motloba,P, Motaung,K S C, Ozougwu,L U, Ikalafeng,B K, Marinda,E, Lukhele,M, Basu,D
Format: Digital revista
Language:English
Published: South African Medical Association 2020
Online Access:http://www.scielo.org.za/scielo.php?script=sci_arttext&pid=S0256-95742020001100021
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spelling oai:scielo:S0256-957420200011000212020-11-27The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South AfricaPillai,JMotloba,PMotaung,K S COzougwu,L UIkalafeng,B KMarinda,ELukhele,MBasu,DBACKGROUND. On 26 March 2020, the South African (SA) government initiated a 21 -day national level 5 lockdown which was subsequently eased off and downgraded to level 4 on 1 May and to level 3 on 1 June. The effect of lockdown measures on SARS-CoV-2 infectivity is currently uncertain. In this article, we analyse the effects of the lockdown measures on the SARS-CoV-2 epidemic in one of the epicentres in SA.OBJECTIVES. To measure the effects of lockdown measures introduced in SA on SARS-CoV-2 attack rates (ARs, the percentage of individuals who tested positive in a specified time period) in Gauteng Province during a 4-month period (March - June 2020).METHODS. In this retrospective cohort study, we used a comprehensive database from an independent pathology laboratory in Gauteng. We analysed trends of positivity rates of reverse transcription polymerase chain reaction tests done during the 4-month period. The ARs are reported over time (unweighted and age-weighted 14-day moving averages) by age groups, gender, and different regions/districts in Gauteng.RESULTS. A total of 162 528 tests were performed at a private laboratory between 5 March and 30 June 2020, of which 20 574 were positive (overall AR 12.7%). These positive tests constituted 44.8% of all positive cases in the province (20 574/45 944). Sixty-two percent of all tests were done in June during lockdown level 3. There was an exponential increase in the AR in June (18.3%) when lockdown was eased to level 3, in comparison with 4.2% (March), 2.2% (April) and 3.3% (May). The increase in June was seen in all the age groups, although it was more pronounced in the 21-60 years age groups than the younger (0 - 20 years) and older (&gt;60 years) age groups. The AR was significantly higher in males (13.2%) compared with females (12.1%) (x2test, p<0.0001).CONCLUSIONS. The findings of this study testify to the rapid increase in ARs resulting from easing of the lockdown regulations, especially to level 3 in June. Of concern is the upward trend in the AR across all age groups, especially <20 years ( 15.9%), which was not reported in other parts of the world. Population age dynamics should therefore be considered when taking future decisions about lockdown regulations.South African Medical AssociationSAMJ: South African Medical Journal v.110 n.11 20202020-11-01journal articletext/htmlhttp://www.scielo.org.za/scielo.php?script=sci_arttext&pid=S0256-95742020001100021en
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author Pillai,J
Motloba,P
Motaung,K S C
Ozougwu,L U
Ikalafeng,B K
Marinda,E
Lukhele,M
Basu,D
spellingShingle Pillai,J
Motloba,P
Motaung,K S C
Ozougwu,L U
Ikalafeng,B K
Marinda,E
Lukhele,M
Basu,D
The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa
author_facet Pillai,J
Motloba,P
Motaung,K S C
Ozougwu,L U
Ikalafeng,B K
Marinda,E
Lukhele,M
Basu,D
author_sort Pillai,J
title The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa
title_short The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa
title_full The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa
title_fullStr The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa
title_full_unstemmed The effect of lockdown regulations on SARS-CoV-2 infectivity in Gauteng Province, South Africa
title_sort effect of lockdown regulations on sars-cov-2 infectivity in gauteng province, south africa
description BACKGROUND. On 26 March 2020, the South African (SA) government initiated a 21 -day national level 5 lockdown which was subsequently eased off and downgraded to level 4 on 1 May and to level 3 on 1 June. The effect of lockdown measures on SARS-CoV-2 infectivity is currently uncertain. In this article, we analyse the effects of the lockdown measures on the SARS-CoV-2 epidemic in one of the epicentres in SA.OBJECTIVES. To measure the effects of lockdown measures introduced in SA on SARS-CoV-2 attack rates (ARs, the percentage of individuals who tested positive in a specified time period) in Gauteng Province during a 4-month period (March - June 2020).METHODS. In this retrospective cohort study, we used a comprehensive database from an independent pathology laboratory in Gauteng. We analysed trends of positivity rates of reverse transcription polymerase chain reaction tests done during the 4-month period. The ARs are reported over time (unweighted and age-weighted 14-day moving averages) by age groups, gender, and different regions/districts in Gauteng.RESULTS. A total of 162 528 tests were performed at a private laboratory between 5 March and 30 June 2020, of which 20 574 were positive (overall AR 12.7%). These positive tests constituted 44.8% of all positive cases in the province (20 574/45 944). Sixty-two percent of all tests were done in June during lockdown level 3. There was an exponential increase in the AR in June (18.3%) when lockdown was eased to level 3, in comparison with 4.2% (March), 2.2% (April) and 3.3% (May). The increase in June was seen in all the age groups, although it was more pronounced in the 21-60 years age groups than the younger (0 - 20 years) and older (&gt;60 years) age groups. The AR was significantly higher in males (13.2%) compared with females (12.1%) (x2test, p<0.0001).CONCLUSIONS. The findings of this study testify to the rapid increase in ARs resulting from easing of the lockdown regulations, especially to level 3 in June. Of concern is the upward trend in the AR across all age groups, especially <20 years ( 15.9%), which was not reported in other parts of the world. Population age dynamics should therefore be considered when taking future decisions about lockdown regulations.
publisher South African Medical Association
publishDate 2020
url http://www.scielo.org.za/scielo.php?script=sci_arttext&pid=S0256-95742020001100021
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